generated from pharmaverse/admiraltemplate
-
Notifications
You must be signed in to change notification settings - Fork 4
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge branch 'main' into modify-building-rcmd-matrix
- Loading branch information
Showing
4 changed files
with
51 additions
and
41 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
|
@@ -2,20 +2,20 @@ on: | |
| workflow_dispatch: | ||
| inputs: | ||
| r-version: | ||
| description: 'The version of R to use' | ||
| default: 'release' | ||
| description: "The version of R to use" | ||
| default: "release" | ||
| required: false | ||
| type: choice | ||
| options: | ||
| - devel | ||
| - latest | ||
| skip-multiversion-docs: | ||
| description: 'Skip creation of multi-version docs' | ||
| description: "Skip creation of multi-version docs" | ||
| default: false | ||
| required: false | ||
| type: boolean | ||
| multiversion-docs-landing-page: | ||
| description: 'Ref to use for the multiversion docs landing page' | ||
| description: "Ref to use for the multiversion docs landing page" | ||
| default: main | ||
| required: false | ||
| type: string | ||
|
|
@@ -36,17 +36,22 @@ on: | |
| workflow_call: | ||
| inputs: | ||
| r-version: | ||
| description: 'The version of R to use' | ||
| default: 'release' | ||
| description: "The version of R to use" | ||
| default: "release" | ||
| required: false | ||
| type: string | ||
| skip-multiversion-docs: | ||
| description: 'Skip creation of multi-version docs' | ||
| description: "Skip creation of multi-version docs" | ||
| default: false | ||
| required: false | ||
| type: boolean | ||
| insert-tweak-page-hook: | ||
| description: "This option customizes the pkgdown::tweak_page function by adding a new custom hook to fix rdrr.io links" | ||
| default: true | ||
| required: false | ||
| type: boolean | ||
| multiversion-docs-landing-page: | ||
| description: 'Ref to use for the multiversion docs landing page' | ||
| description: "Ref to use for the multiversion docs landing page" | ||
| default: main | ||
| required: false | ||
| type: string | ||
|
|
@@ -162,6 +167,7 @@ jobs: | |
|
|
||
| - name: Add script to fix rdrr.io links for pharmaverse packages | ||
| uses: "DamianReeves/[email protected]" | ||
| if: inputs.insert-tweak-page-hook | ||
| with: | ||
| path: ./.Rprofile | ||
| write-mode: append | ||
|
|
@@ -203,8 +209,10 @@ jobs: | |
| invisible() | ||
| } | ||
| setHook("UserHook::admiralci::tweak_page", tweak_rdrr_url) | ||
| print("Tweak rdrr.io links for admiral pharmaverse packages.") | ||
| if ("${{ inputs.insert-tweak-page-hook }}" == "true") { | ||
| setHook("UserHook::admiralci::tweak_page", tweak_rdrr_url) | ||
| print("Tweak rdrr.io links for admiral pharmaverse packages.") | ||
| } | ||
| - name: Publish documentation | ||
| run: | | ||
|
|
@@ -217,32 +225,34 @@ jobs: | |
| } | ||
| fi | ||
| Rscript - <<EOF | ||
| pkgdown_env <- asNamespace("pkgdown") | ||
| rlang::env_unlock(env = pkgdown_env) | ||
| rlang::env_binding_unlock(env = pkgdown_env) | ||
| pkgdown_env\$call_hook <- function(hook_name, ...) { | ||
| hooks <- getHook(paste0("UserHook::admiralci::", hook_name)) | ||
| if (!is.list(hooks)) { | ||
| hooks <- list(hooks) | ||
| if ("${{ inputs.insert-tweak-page-hook }}" == "true") { | ||
| pkgdown_env <- asNamespace("pkgdown") | ||
| rlang::env_unlock(env = pkgdown_env) | ||
| rlang::env_binding_unlock(env = pkgdown_env) | ||
| pkgdown_env\$call_hook <- function(hook_name, ...) { | ||
| hooks <- getHook(paste0("UserHook::admiralci::", hook_name)) | ||
| if (!is.list(hooks)) { | ||
| hooks <- list(hooks) | ||
| } | ||
| purrr::map(hooks, function(fun) { | ||
| fun(...) | ||
| }) |> | ||
| invisible() | ||
| } | ||
| purrr::map(hooks, function(fun) { | ||
| fun(...) | ||
| }) %>% | ||
| invisible() | ||
| } | ||
| environment(pkgdown_env\$call_hook) <- pkgdown_env | ||
| tweak_page <- body(pkgdown_env\$tweak_page) | ||
| body(pkgdown_env\$tweak_page) <- | ||
| as.call( | ||
| append( | ||
| as.list(tweak_page), | ||
| expression(call_hook("tweak_page", html, name, pkg)), | ||
| after=length(tweak_page) | ||
| environment(pkgdown_env\$call_hook) <- pkgdown_env | ||
| tweak_page <- body(pkgdown_env\$tweak_page) | ||
| body(pkgdown_env\$tweak_page) <- | ||
| as.call( | ||
| append( | ||
| as.list(tweak_page), | ||
| expression(call_hook("tweak_page", html, name, pkg)), | ||
| after=length(tweak_page) | ||
| ) | ||
| ) | ||
| ) | ||
| rlang::env_binding_lock(env = pkgdown_env) | ||
| rlang::env_lock(pkgdown_env) | ||
| require(desc::desc_get("Package"), character.only = TRUE) | ||
| rlang::env_binding_lock(env = pkgdown_env) | ||
| rlang::env_lock(pkgdown_env) | ||
| require(desc::desc_get("Package"), character.only = TRUE) | ||
| } | ||
| clean = FALSE | ||
| if ("${{ inputs.skip-multiversion-docs }}" == "true"){ | ||
| clean = TRUE | ||
|
|
||
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters