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FIX - Changing the sign of the argument of the exponential in LOWER_WALLS #1109

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merged 1 commit into from
Oct 10, 2024

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Iximiel
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@Iximiel Iximiel commented Sep 9, 2024

Description

This should solve #1091, see the issue for the problem

I want to benchmark the (-x) version against the (abs(x)) version, but maybe that is a thing for another PR.

Shall we add a new test to check the sign in this and maybe other COLVARs?

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I would like my code to appear in release XXXXX

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  • changes to code or doc authored by PLUMED developers, or additions of code in the core or within the default modules
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@GiovanniBussi
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I think the abs(x) vs -x has no impact on performance. I would use the most robust one.

Something that instead might be relevant (if you have many of these biases) is that they construct a lot of actions. @gtribello is it necessary? Are you aware that you can define intermediate values in lepton?

A test for it is here though it is not very instructive. But you can do something like:

FUNC=7*a^n;a=(x-x0);x0=3;n=2

The only counterintuitive thing is that values are parsed from right to left, so that you first use quantities then define them.

The example above should do 7*(x-3)^2

The advantage is that:

  • there is a single lepton call (performance gain should be measurable if you have many of these)
  • lepton simplifies the expression (should be irrelevant in this case)

@carlocamilloni
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@Iximiel @GiovanniBussi @gtribello this needs to be retarget to 2.10, I would then merge it to fix the bug. The lepton change is about performances and can be done in a second moment

@Iximiel Iximiel changed the base branch from master to v2.10 October 10, 2024 13:10
@carlocamilloni
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@Iximiel there are two lines added in multicolvardensity, why is that so?

@Iximiel
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Iximiel commented Oct 10, 2024

@Iximiel there are two lines added in multicolvardensity, why is that so?

I think that they are some things that comes from the various merges of master and v2.10
I am rebasing those changes away

@carlocamilloni carlocamilloni merged commit 4df397b into plumed:v2.10 Oct 10, 2024
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3 participants