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timeliness: Fix update of timelag values #200

timeliness: Fix update of timelag values

timeliness: Fix update of timelag values #200

Workflow file for this run

name: Integration Test
on: [push, pull_request]
jobs:
test:
runs-on: ubuntu-latest
services:
postgres:
image: postgres:latest
env:
POSTGRES_USER: postgres
POSTGRES_HOST_AUTH_METHOD: trust
POSTGRES_DB: iatidq
# Set health checks to wait until postgres has started
# https://docs.github.com/en/actions/using-containerized-services/creating-postgresql-service-containers
options: >-
--health-cmd pg_isready
--health-interval 10s
--health-timeout 5s
--health-retries 5
ports:
- '127.0.0.1:5433:5432'
strategy:
matrix:
python-version: [ '3.8', '3.10' ]
steps:
- uses: actions/checkout@v3
with:
submodules: recursive
- name: Setup python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
cache: pip
cache-dependency-path: requirements_dev.txt
- name: Install older setuptools for use_2to3 https://stackoverflow.com/questions/72414481/error-in-anyjson-setup-command-use-2to3-is-invalid
run: pip install "setuptools<58" wheel
- name: Install requirements_dev.txt
run: pip install -r requirements_dev.txt
- name: Config
run: sed 's/# APP_ADMIN/APP_ADMIN/' config.py.tmpl > config.py
- name: Init database
run: flask init_db
- run: cp tests/organisations_with_identifiers.csv tests/organisations_with_identifiers.csv.full
- run: cat tests/organisations_with_identifiers.csv.full | grep -E '(country|Belgium)' > tests/organisations_with_identifiers.csv
- run: flask setup --force --admin-from-config
- run: flask download_data
- run: flask import_data
- run: /usr/bin/time -v flask test_data
- run: flask aggregate_results --force
- run: flask setup_sampling
- name: Run the tests
run: flask run & py.test integration_tests