Implement a Shell based Executor #263
Workflow file for this run
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| # This workflow is used to run the unittest of pyiron | |
| name: Unittests-flux | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.operating-system }} | |
| strategy: | |
| matrix: | |
| include: | |
| - operating-system: ubuntu-latest | |
| python-version: '3.11' | |
| label: linux-64-py-3-11-openmpi | |
| prefix: /Users/runner/miniconda3/envs/my-env | |
| environment-file: .ci_support/environment-openmpi.yml | |
| - operating-system: ubuntu-latest | |
| python-version: '3.11' | |
| label: linux-64-py-3-11-mich | |
| prefix: /usr/share/miniconda3/envs/my-env | |
| environment-file: .ci_support/environment-mpich.yml | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: conda-incubator/[email protected] | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| mamba-version: "*" | |
| channels: conda-forge | |
| miniforge-variant: Mambaforge | |
| channel-priority: strict | |
| auto-update-conda: true | |
| environment-file: ${{ matrix.environment-file }} | |
| - name: Install flux | |
| shell: bash -l {0} | |
| run: mamba install -y flux-core coverage | |
| - name: Setup | |
| shell: bash -l {0} | |
| run: pip install --no-deps . | |
| - name: Test | |
| shell: bash -l {0} | |
| timeout-minutes: 5 | |
| run: cd tests; coverage run --omit pympipool/_version.py -m unittest discover . | |
| env: | |
| OMPI_MCA_plm: 'isolated' | |
| OMPI_MCA_rmaps_base_oversubscribe: 'yes' | |
| OMPI_MCA_btl_vader_single_copy_mechanism: 'none' | |
| - name: Test Flux | |
| shell: bash -l {0} | |
| timeout-minutes: 5 | |
| run: > | |
| flux start | |
| coverage run --omit pympipool/_version.py -m unittest tests/test_flux.py; | |
| coverage combine | |
| env: | |
| OMPI_MCA_plm: 'isolated' | |
| OMPI_MCA_rmaps_base_oversubscribe: 'yes' | |
| OMPI_MCA_btl_vader_single_copy_mechanism: 'none' | |
| - name: Coveralls | |
| if: matrix.label == 'linux-64-py-3-11-openmpi' | |
| uses: coverallsapp/github-action@v2 |