changes to MANIFEST.in

pysam-developers · Jun 16, 2014 · fa1af6f · fa1af6f
1 parent 422071a
commit fa1af6f
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Showing 5 changed files with 10 additions and 15 deletions.
diff --git a/.gitignore b/.gitignore
@@ -19,7 +19,7 @@ pysam/TabProxies.c
 pysam/csamtools.c
 pysam/ctabix.c
 pysam/cvcf.c
-
+pysam/chtslib.c  
 
 ###### Generic python ignores below ######
 

diff --git a/MANIFEST.in b/MANIFEST.in
@@ -9,18 +9,9 @@ include INSTALL
 include KNOWN_BUGS
 include THANKS
 include distribute_setup.py
-include pysam/csamtools.pxd
-include pysam/csamtools.pyx
-include pysam/csamtools.c
-include pysam/ctabix.pxd
-include pysam/ctabix.c
-include pysam/ctabix.pyx
-include pysam/TabProxies.c
-include pysam/TabProxies.pyx
-include pysam/TabProxies.pxd
-include pysam/cvcf.pyx
-include pysam/cvcf.pxd
-include pysam/cvcf.c
+include pysam/c*.pxd
+include pysam/c*.pyx
+include pysam/c*.c
 include pysam/*.c
 include pysam/*.h
 include pysam/pysam_util.h
@@ -29,6 +20,10 @@ include samtools/*.h
 include samtools/*/*.h
 include tabix/*.c
 include tabix/*.h
+include htslib/*.c
+include htslib/*.h
+include htslib/htslib/*.h
+include htslib/htslib/*.c
 include pysam.py
 
 # pysam tests

diff --git a/htslib/__init__.py b/htslib/__init__.py
diff --git a/htslib/htslib/__init__.py b/htslib/htslib/__init__.py
diff --git a/setup.py b/setup.py
@@ -161,11 +161,11 @@ def _compareAndCopy(src, srcdir, destdir, exclude):
 # cp samtools/win32/*.h pysam/include/win32
 
 try:
-    from setuptools import Extension, setup, find_packages
+    from setuptools import Extension, setup
 except ImportError:
     from ez_setup import use_setuptools
     use_setuptools()
-    from setuptools import Extension, setup, find_packages
+    from setuptools import Extension, setup
 
 #######################################################
 #######################################################