chore: Revdepcheck results

r-lib · Oct 19, 2024 · 49a63de · 49a63de
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diff --git a/revdep/README.md b/revdep/README.md
@@ -4,11 +4,5 @@
 
 |package    |version |error |warning |note |
 |:----------|:-------|:-----|:-------|:----|
-|incidence2 |1.2.3   |1     |        |     |
-
-## New problems (1)
-
-|package |version |error  |warning |note |
-|:-------|:-------|:------|:-------|:----|
-|[prt](problems.md#prt)|0.1.5   |__+2__ |__+1__  |     |
+|tidyseurat |0.8.0   |1     |        |     |
 
diff --git a/revdep/cran.md b/revdep/cran.md
@@ -1,20 +1,12 @@
 ## revdepcheck results
 
-We checked 100 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
+We checked 122 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
 
- * We saw 1 new problems
+ * We saw 0 new problems
  * We failed to check 1 packages
 
 Issues with CRAN packages are summarised below.
 
-### New problems
-(This reports the first line of each new failure)
-
-* prt
-  checking examples ... ERROR
-  checking tests ... ERROR
-  checking re-building of vignette outputs ... WARNING
-
 ### Failed to check
 
-* incidence2 (NA)
+* tidyseurat (NA)
diff --git a/revdep/failures.md b/revdep/failures.md
@@ -1,62 +1,62 @@
-# incidence2
+# tidyseurat
 
 <details>
 
-* Version: 1.2.3
-* GitHub: https://github.com/reconverse/incidence2
-* Source code: https://github.com/cran/incidence2
-* Date/Publication: 2021-11-07 22:00:02 UTC
-* Number of recursive dependencies: 87
+* Version: 0.8.0
+* GitHub: https://github.com/stemangiola/tidyseurat
+* Source code: https://github.com/cran/tidyseurat
+* Date/Publication: 2024-01-10 04:50:02 UTC
+* Number of recursive dependencies: 195
 
-Run `revdepcheck::cloud_details(, "incidence2")` for more info
+Run `revdepcheck::cloud_details(, "tidyseurat")` for more info
 
 </details>
 
 ## In both
 
-*   checking whether package ‘incidence2’ can be installed ... ERROR
+*   checking whether package ‘tidyseurat’ can be installed ... ERROR
     ```
     Installation failed.
-    See ‘/tmp/workdir/incidence2/new/incidence2.Rcheck/00install.out’ for details.
+    See ‘/tmp/workdir/tidyseurat/new/tidyseurat.Rcheck/00install.out’ for details.
     ```
 
 ## Installation
 
 ### Devel
 
 ```
-* installing *source* package ‘incidence2’ ...
-** package ‘incidence2’ successfully unpacked and MD5 sums checked
+* installing *source* package ‘tidyseurat’ ...
+** package ‘tidyseurat’ successfully unpacked and MD5 sums checked
 ** using staged installation
 ** R
 ** data
 *** moving datasets to lazyload DB
 ** inst
 ** byte-compile and prepare package for lazy loading
-Error : The `x` argument of `as_tibble()` can't be missing as of tibble 3.0.0.
-Error: unable to load R code in package ‘incidence2’
+Error: package or namespace load failed for ‘SeuratObject’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
+ namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.4 is required
 Execution halted
-ERROR: lazy loading failed for package ‘incidence2’
-* removing ‘/tmp/workdir/incidence2/new/incidence2.Rcheck/incidence2’
+ERROR: lazy loading failed for package ‘tidyseurat’
+* removing ‘/tmp/workdir/tidyseurat/new/tidyseurat.Rcheck/tidyseurat’
 
 
 ```
 ### CRAN
 
 ```
-* installing *source* package ‘incidence2’ ...
-** package ‘incidence2’ successfully unpacked and MD5 sums checked
+* installing *source* package ‘tidyseurat’ ...
+** package ‘tidyseurat’ successfully unpacked and MD5 sums checked
 ** using staged installation
 ** R
 ** data
 *** moving datasets to lazyload DB
 ** inst
 ** byte-compile and prepare package for lazy loading
-Error : The `x` argument of `as_tibble()` can't be missing as of tibble 3.0.0.
-Error: unable to load R code in package ‘incidence2’
+Error: package or namespace load failed for ‘SeuratObject’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
+ namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.4 is required
 Execution halted
-ERROR: lazy loading failed for package ‘incidence2’
-* removing ‘/tmp/workdir/incidence2/old/incidence2.Rcheck/incidence2’
+ERROR: lazy loading failed for package ‘tidyseurat’
+* removing ‘/tmp/workdir/tidyseurat/old/tidyseurat.Rcheck/tidyseurat’
 
 
 ```
diff --git a/revdep/problems.md b/revdep/problems.md
@@ -1,81 +1 @@
-# prt
-
-<details>
-
-* Version: 0.1.5
-* GitHub: https://github.com/nbenn/prt
-* Source code: https://github.com/cran/prt
-* Date/Publication: 2022-07-18 09:40:02 UTC
-* Number of recursive dependencies: 67
-
-Run `revdepcheck::cloud_details(, "prt")` for more info
-
-</details>
-
-## Newly broken
-
-*   checking examples ... ERROR
-    ```
-    Running examples in ‘prt-Ex.R’ failed
-    The error most likely occurred in:
-    
-    > ### Name: print.prt
-    > ### Title: Printing prt
-    > ### Aliases: print.prt format.prt trunc_dt
-    > 
-    > ### ** Examples
-    > 
-    > cars <- as_prt(mtcars)
-    ...
-      9.   ├─base::format(x, ..., n = n, width = width, max_extra_cols = max_extra_cols)
-     10.   └─prt:::format.prt(x, ..., n = n, width = width, max_extra_cols = max_extra_cols)
-     11.     ├─base::format(trunc_dt(x, n = n, width = width, max_extra_cols = max_extra_cols))
-     12.     └─prt::trunc_dt(x, n = n, width = width, max_extra_cols = max_extra_cols)
-     13.       └─prt:::shrink_dt(df, rows)
-     14.         └─pillar::colonnade(df, has_row_id = FALSE)
-     15.           └─lifecycle::deprecate_stop("1.9.0", "pillar::colonnade()", "pillar::tbl_format_setup()")
-     16.             └─lifecycle:::deprecate_stop0(msg)
-     17.               └─rlang::cnd_signal(...)
-    Execution halted
-    ```
-
-*   checking tests ... ERROR
-    ```
-      Running ‘testthat.R’
-    Running the tests in ‘tests/testthat.R’ failed.
-    Last 13 lines of output:
-       16.   │ │     └─base::is.factor(x)
-       17.   │ └─base::paste0(...)
-       18.   ├─base::format(x, ..., n = n, width = width, max_extra_cols = max_extra_cols)
-       19.   └─prt:::format.prt(x, ..., n = n, width = width, max_extra_cols = max_extra_cols)
-       20.     ├─base::format(trunc_dt(x, n = n, width = width, max_extra_cols = max_extra_cols))
-       21.     └─prt::trunc_dt(x, n = n, width = width, max_extra_cols = max_extra_cols)
-       22.       └─prt:::shrink_dt(df, rows)
-       23.         └─pillar::colonnade(df, has_row_id = FALSE)
-       24.           └─lifecycle::deprecate_stop("1.9.0", "pillar::colonnade()", "pillar::tbl_format_setup()")
-       25.             └─lifecycle:::deprecate_stop0(msg)
-       26.               └─rlang::cnd_signal(...)
-      
-      [ FAIL 4 | WARN 0 | SKIP 0 | PASS 257 ]
-      Error: Test failures
-      Execution halted
-    ```
-
-*   checking re-building of vignette outputs ... WARNING
-    ```
-    Error(s) in re-building vignettes:
-      ...
-    --- re-building ‘prt.Rmd’ using rmarkdown
-    Quitting from lines 35-37 (prt.Rmd) 
-    Error: processing vignette 'prt.Rmd' failed with diagnostics:
-    `colonnade()` was deprecated in pillar 1.9.0 and is now defunct.
-    ℹ Please use `tbl_format_setup()` instead.
-    --- failed re-building ‘prt.Rmd’
-    
-    SUMMARY: processing the following file failed:
-      ‘prt.Rmd’
-    
-    Error: Vignette re-building failed.
-    Execution halted
-    ```
-
+*Wow, no problems at all. :)*