R-CMD-check

Clean up documentation, configuration, and CI following S2 version update #387

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Run time

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Job	Run time
test	3m 11s
macos-latest (release)	3m 29s
windows-latest (4.2)	12m 3s
windows-latest (4.3)	12m 42s
windows-latest (release)	11m 47s
ubuntu-latest (devel)	7m 57s
ubuntu-latest (release)	7m 55s
ubuntu-latest (oldrel-1)	7m 44s
	1h 6m 48s