Merge pull request #3287 from radical-cybertools/fix/task_update #2465
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - 'devel*' | |
| pull_request: | |
| branches: | |
| - 'devel*' | |
| schedule: | |
| - cron: '45 6 * * *' | |
| jobs: | |
| linting: | |
| runs-on: ubuntu-latest | |
| continue-on-error: true | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 2 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.7 | |
| - name: Install dependencies | |
| run: | | |
| python -m venv testenv | |
| . testenv/bin/activate | |
| python -m pip install --upgrade pip setuptools wheel | |
| python -m pip install -r requirements-ci.txt | |
| radical-stack | |
| - name: Lint with flake8 and pylint | |
| run: | | |
| . testenv/bin/activate | |
| LOG=`git log -n 1 | grep Merge` || echo 'no merging' && exit 0 | |
| NEW=`echo $LOG | cut -d ' ' -f2` | |
| OLD=`echo $LOG | cut -d ' ' -f3` | |
| (test -z "$NEW" || test -z "$OLD") && echo 'nothing to lint' && exit 0 | |
| DIFF=`git diff --name-only --diff-filter=db $NEW..$OLD` | |
| FILTERED=$(for f in $DIFF; do echo $f; done | \ | |
| grep -v -e 'concepts/' -e '/archive/' | \ | |
| grep -e '\.py$' | sed "s|^|$PWD/|") | |
| test -z "$FILTERED" && echo 'nothing to lint' && exit 0 | |
| flake8 $FILTERED | |
| pylint $FILTERED | |
| tests: | |
| runs-on: ubuntu-latest | |
| continue-on-error: true | |
| strategy: | |
| matrix: | |
| python-version: [ '3.7', '3.8', '3.9', '3.10', '3.11', '3.12' ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 2 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m venv testenv | |
| . testenv/bin/activate | |
| python -m pip install --upgrade pip setuptools wheel | |
| python -m pip install -r requirements-ci.txt | |
| radical-stack | |
| - name: Unit tests | |
| run: | | |
| . testenv/bin/activate | |
| radical-stack | |
| coverage run --source=radical.pilot -m pytest -ra -vvv --showlocals tests/unit_tests/ tests/component_tests/ | |
| coverage xml | |
| - uses: codecov/codecov-action@v4 | |
| if: ${{ matrix.python-version == '3.7' }} | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
| with: | |
| files: ./coverage.xml | |
| notebook_integration_test: | |
| strategy: | |
| matrix: | |
| python-version: [ '3.7', '3.8', '3.9', '3.10', '3.11', '3.12' ] | |
| uses: ./.github/workflows/run-rp-notebook.yml | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| requirements-file: 'requirements-docs-ci.txt' | |
| notebook-name: 'getting_started.ipynb' | |
| analytics: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ '3.7', '3.8', '3.9', '3.10', '3.11', '3.12' ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 2 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| sudo apt update | |
| sudo apt install -y texlive cm-super | |
| sudo apt install -y texlive-fonts-extra texlive-extra-utils dvipng | |
| sudo apt install -y texlive-fonts-recommended texlive-latex-extra | |
| python -m venv testenv | |
| . testenv/bin/activate | |
| python -m pip install --upgrade pip setuptools wheel | |
| python -m pip install -r requirements-ci.txt | |
| - name: Analyse example session | |
| timeout-minutes: 5 | |
| if: always() | |
| env: | |
| RADICAL_LOG_LVL: 'DEBUG' | |
| RADICAL_REPORT: 'TRUE' | |
| run: | | |
| . testenv/bin/activate | |
| ./examples/00_getting_started.py local.localhost | |
| SID=$(find . -name "rp.session*" -type d -exec basename {} "rp.session" \;) | |
| echo "SID: $SID" | |
| radical-analytics-inspect "$SID" | |
| mkdir artifacts | |
| ls -la | |
| cp -R *.png *.stats artifacts | |
| - name: Collect session | |
| if: always() | |
| run: | | |
| SIDCLIENT=$(find . -name "rp.session*" -type d -exec basename {} "rp.session" \;) | |
| SIDAGENT="$HOME/radical.pilot.sandbox/$SIDCLIENT" | |
| echo "SIDCLIENT : $SIDCLIENT" | |
| echo "SIDAGENT : $SIDAGENT" | |
| CLIENTNAME="analytics_client_$SIDCLIENT" | |
| AGENTNAME="analytics_agent_$SIDCLIENT" | |
| mkdir sessions_analytics | |
| # tar cfj $CLIENTNAME.tar.bz2 $SIDCLIENT | |
| tar cfj $CLIENTNAME.tar.bz2 `find $SIDCLIENT -type d -print` | |
| cp -R $CLIENTNAME.tar.bz2 sessions_analytics | |
| if [ -d "$SIDAGENT" ]; then | |
| tar cfj $AGENTNAME.tar.bz2 `find $SIDAGENT -type d -print` | |
| cp -R $AGENTNAME.tar.bz2 sessions_analytics | |
| fi | |
| - name: Upload artifacts | |
| if: always() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: artifacts_${{ matrix.python-version }} | |
| path: artifacts | |
| retention-days: 5 | |
| overwrite: true | |
| - name: Upload sessions | |
| if: always() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: sessions_analytics_${{ matrix.python-version }} | |
| path: sessions_analytics | |
| retention-days: 5 | |
| overwrite: true | |