add collection_type to input collection in JBrowse2 (#1485) #2

Job	Run time
Setup cache and determine changed repositories (3.11)	4m 43s
Check file sizes	0s
Lint Python scripts	0s
Lint R scripts (ubuntu-20.04, release)	3m 28s
Lint tool-list (3.11)	2m 20s
Test tools (0, 3.11)	1h 13m 2s
Test tools (1, 3.11)	23m 21s
Test tools (2, 3.11)	1h 19m 26s
Test tools (3, 3.11)	42m 59s
Combine chunked test results (3.11)	38s
Check workflow success	0s
Deploy	0s
Report deploy status	0s
	3h 49m 57s

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