Commit formatting and linting fixes

src/laue_dials/__init__.py

@@ -2,9 +2,11 @@
 
 if sys.version_info[:2] >= (3, 8):
     # TODO: Import directly (no need for conditional) when `python_requires = >= 3.8`
-    from importlib.metadata import PackageNotFoundError, version  # pragma: no cover
+    from importlib.metadata import (PackageNotFoundError,  # pragma: no cover
+                                    version)
 else:
-    from importlib_metadata import PackageNotFoundError, version  # pragma: no cover
+    from importlib_metadata import (PackageNotFoundError,  # pragma: no cover
+                                    version)
 
 try:
     # Change here if project is renamed and does not equal the package name

src/laue_dials/algorithms/laue.py

@@ -100,9 +100,8 @@ def gen_beam_models(expts, refls):
     # Imports
     from copy import deepcopy
 
-    from dials.algorithms.refinement.prediction.managed_predictors import (
-        ExperimentsPredictorFactory,
-    )
+    from dials.algorithms.refinement.prediction.managed_predictors import \
+        ExperimentsPredictorFactory
 
     # Instantiate new ExperimentList/reflection_table
     new_expts = ExperimentList()

src/laue_dials/command_line/index.py

@@ -8,9 +8,11 @@
 
 import libtbx.phil
 from dials.util import show_mail_handle_errors
-from dials.util.options import ArgumentParser, reflections_and_experiments_from_files
+from dials.util.options import (ArgumentParser,
+                                reflections_and_experiments_from_files)
 
-from laue_dials.algorithms.monochromatic import initial_index, scan_varying_refine
+from laue_dials.algorithms.monochromatic import (initial_index,
+                                                 scan_varying_refine)
 
 logger = logging.getLogger("laue-dials.command_line.index")
 

src/laue_dials/command_line/integrate.py

@@ -17,7 +17,8 @@
 from cctbx import sgtbx
 from dials.array_family import flex
 from dials.util import show_mail_handle_errors
-from dials.util.options import ArgumentParser, reflections_and_experiments_from_files
+from dials.util.options import (ArgumentParser,
+                                reflections_and_experiments_from_files)
 
 from laue_dials.algorithms.integration import SegmentedImage
 

src/laue_dials/command_line/optimize_indexing.py

@@ -13,7 +13,8 @@
 import numpy as np
 from dials.array_family.flex import reflection_table
 from dials.util import show_mail_handle_errors
-from dials.util.options import ArgumentParser, reflections_and_experiments_from_files
+from dials.util.options import (ArgumentParser,
+                                reflections_and_experiments_from_files)
 from dxtbx.model import ExperimentList
 
 logger = logging.getLogger("laue-dials.command_line.optimize_indexing")

src/laue_dials/command_line/plot_wavelengths.py

@@ -8,7 +8,8 @@
 
 import libtbx.phil
 from dials.util import show_mail_handle_errors
-from dials.util.options import ArgumentParser, reflections_and_experiments_from_files
+from dials.util.options import (ArgumentParser,
+                                reflections_and_experiments_from_files)
 from matplotlib import pyplot as plt
 
 logger = logging.getLogger("laue-dials.command_line.plot_wavelengths")

src/laue_dials/command_line/predict.py

@@ -16,7 +16,8 @@
 from dials.array_family import flex
 from dials.array_family.flex import reflection_table
 from dials.util import show_mail_handle_errors
-from dials.util.options import ArgumentParser, reflections_and_experiments_from_files
+from dials.util.options import (ArgumentParser,
+                                reflections_and_experiments_from_files)
 from dxtbx.model import ExperimentList
 
 from laue_dials.algorithms.outliers import gen_kde

src/laue_dials/command_line/refine.py

@@ -19,11 +19,8 @@
 from dxtbx.model import ExperimentList
 from dxtbx.model.experiment_list import ExperimentListFactory
 
-from laue_dials.algorithms.laue import (
-    gen_beam_models,
-    remove_beam_models,
-    store_wavelengths,
-)
+from laue_dials.algorithms.laue import (gen_beam_models, remove_beam_models,
+                                        store_wavelengths)
 
 logger = logging.getLogger("laue-dials.command_line.refine")
 

src/laue_dials/command_line/sequence_to_stills.py

@@ -14,7 +14,8 @@
 from dials.array_family import flex
 from dials.array_family.flex import reflection_table
 from dials.util import show_mail_handle_errors
-from dials.util.options import ArgumentParser, reflections_and_experiments_from_files
+from dials.util.options import (ArgumentParser,
+                                reflections_and_experiments_from_files)
 from dxtbx.model import MosaicCrystalSauter2014
 from dxtbx.model.experiment_list import Experiment, ExperimentList
 from libtbx.phil import parse