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new scenario

new scenario #131

Triggered via push November 19, 2024 11:03
Status Failure
Total duration 55m 29s
Artifacts 2

check-bioc.yml

on: push
Matrix: build-check
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20 errors and 59 warnings
macOS-latest (4.3)
cannot read from connection
macOS-latest (4.3)
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macOS-latest (4.3)
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macOS-latest (4.3)
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macOS-latest (4.3)
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macOS-latest (4.3)
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macOS-latest (4.3)
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macOS-latest (4.3)
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macOS-latest (4.3)
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macOS-latest (4.3)
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windows-latest (4.3)
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windows-latest (4.3)
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windows-latest (4.3)
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windows-latest (4.3)
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windows-latest (4.3)
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windows-latest (4.3)
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windows-latest (4.3)
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windows-latest (4.3)
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windows-latest (4.3)
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windows-latest (4.3)
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ubuntu-latest (4.3)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
macOS-latest (4.3)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
harfbuzz 10.0.1_1 is already installed and up-to-date. To reinstall 10.0.1_1, run: brew reinstall harfbuzz
macOS-latest (4.3)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (4.3)
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (4.3)
cairo 1.18.2 is already installed and up-to-date. To reinstall 1.18.2, run: brew reinstall cairo
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
'::' or ':::' import not declared from: ‘scuttle’
macOS-latest (4.3)
Codoc mismatches from documentation object 'get_frac_exprs_sampleAgnostic':
macOS-latest (4.3)
Undocumented arguments in documentation object 'process_abundance_expression_info'
macOS-latest (4.3)
Files in the 'vignettes' directory but no files in 'inst/doc':
macOS-latest (4.3)
Directory 'inst/doc' does not exist.
macOS-latest (4.3)
'::' or ':::' import not declared from: ‘scuttle’
macOS-latest (4.3)
Codoc mismatches from documentation object 'get_frac_exprs_sampleAgnostic':
macOS-latest (4.3)
Undocumented arguments in documentation object 'process_abundance_expression_info'
macOS-latest (4.3)
Files in the 'vignettes' directory but no files in 'inst/doc':
macOS-latest (4.3)
Directory 'inst/doc' does not exist.
windows-latest (4.3)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
windows-latest (4.3)
'::' or ':::' import not declared from: 'scuttle'
windows-latest (4.3)
Codoc mismatches from documentation object 'get_frac_exprs_sampleAgnostic':
windows-latest (4.3)
Undocumented arguments in documentation object 'process_abundance_expression_info'
windows-latest (4.3)
Files in the 'vignettes' directory but no files in 'inst/doc':
windows-latest (4.3)
Directory 'inst/doc' does not exist.
windows-latest (4.3)
'::' or ':::' import not declared from: 'scuttle'
windows-latest (4.3)
Codoc mismatches from documentation object 'get_frac_exprs_sampleAgnostic':
windows-latest (4.3)
Undocumented arguments in documentation object 'process_abundance_expression_info'
windows-latest (4.3)
Files in the 'vignettes' directory but no files in 'inst/doc':
windows-latest (4.3)
Directory 'inst/doc' does not exist.
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:

Artifacts

Produced during runtime
Name Size
Windows-biocversion-RELEASE_3_17-r-4.3-results
825 MB
macOS-biocversion-RELEASE_3_17-r-4.3-results
825 MB