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Tidy up markup
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benmwebb committed Aug 26, 2024
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6 changes: 3 additions & 3 deletions frontend/multifoxs/templates/help.html
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Expand Up @@ -72,21 +72,21 @@ <h3><a name="sampleinput"></a><font color='#B22222'>Sample input</font></h3>
<ul>

<li><b> Replication protein A (DNA binding domains, PDB 1fgu, chain A) </b> PDB contains both open and closed conformations. The input SAXS profile was simulated using the closed conformation (PDB 1jmc). We start MultiFoXS form the open conformation (PDB 1fgu, chain A) and obtained the closed one: <br/>
<a href="{{ url_for("static", filename="1fguA.pdb") }}"> PDB </a> (or <a href="{{ url_for("static", filename="1fguA.cif") }}">mmCIF</a>)<br/>
<a href="{{ url_for("static", filename="1fguA.pdb") }}"> PDB</a> (or <a href="{{ url_for("static", filename="1fguA.cif") }}">mmCIF</a>)<br/>
<a href="{{ url_for("static", filename="1fguA_linkers.txt") }}"> Flexible residues </a> <br/>
<a href="{{ url_for("static", filename="1fguA_iq.dat") }}"> SAXS profile </a> <br/>
<a href="{{ url_for("results", name="1fgu_17_39_12_29_11_115", passwd="ewpRW9inBV") }}"> MultiFoXS output </a>
</li>

<li><b> DNA ligase without DNA </b> - multi-domain protein, data from Cotner-Gohara et al. Biochemistry 2010: <br/>
<a href="{{ url_for("static", filename="ligase.pdb") }}"> PDB </a> (or <a href="{{ url_for("static", filename="ligase.cif") }}">mmCIF</a>)<br/>
<a href="{{ url_for("static", filename="ligase.pdb") }}"> PDB</a> (or <a href="{{ url_for("static", filename="ligase.cif") }}">mmCIF</a>)<br/>
<a href="{{ url_for("static", filename="ligase_linkers.txt") }}"> Flexible residues </a> <br/>
<a href="{{ url_for("static", filename="ligase_iq.dat") }}"> SAXS profile </a> <br/>
<a href="{{ url_for("results", name="ligase1000_54_25_15_5_9_115", passwd="lFMsIIx49D") }}"> MultiFoXS output </a>
</li>

<li><b> Full length prion protein </b> - a protein with 100-residue disordered region, data from Carter at al. Biophys J. 2015: <br/>
<a href="{{ url_for("static", filename="prion.pdb") }}"> PDB </a> (or <a href="{{ url_for("static", filename="prion.cif") }}">mmCIF</a>)<br/>
<a href="{{ url_for("static", filename="prion.pdb") }}"> PDB</a> (or <a href="{{ url_for("static", filename="prion.cif") }}">mmCIF</a>)<br/>
<a href="{{ url_for("static", filename="prion_linkers.txt") }}"> Flexible residues </a> <br/>
<a href="{{ url_for("static", filename="prion_iq.dat") }}"> SAXS profile </a> <br/>
<a href="{{ url_for("results", name="prion10000_15_18_16_5_9_115", passwd="jZX9tlSX3u") }}"> MultiFoXS output </a>
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