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Implementation of CRAM 3.1 codecs. #1714

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@cmnbroad cmnbroad commented Sep 4, 2024

This is a squashed and rebased branch containing all of the changes from Yash's CRAM 3.1 codec branches. Draft until I get all of the issues resolved. Replacement for #1618, 1644, 1663 and 1704.

@lbergelson lbergelson added the cram label Oct 1, 2024
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