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fix cd hit download directory
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andrewjpage committed Sep 7, 2017
1 parent f327d54 commit 6de5049
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Showing 2 changed files with 4 additions and 5 deletions.
5 changes: 2 additions & 3 deletions .travis.yml
Original file line number Diff line number Diff line change
Expand Up @@ -10,15 +10,14 @@ cache:
- build/parallel-20160722
- build/parallel-20170822
- build/bedtools2
- build/cd-hit-v4.6.8-2017-0621-source
- build/cd-hit-v4.6.8-2017-0621
- build/prank-msa-master
- build/ncbi-blast-2.6.0+
- build/mcl-14-137
- build/fasttree
perl:
- "5.14"
- "5.20"
- "5.24"
- "5.26"
env:
- PARALLEL_VERSION=20160722
- PARALLEL_VERSION=20170822
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4 changes: 2 additions & 2 deletions install_dependencies.sh
Original file line number Diff line number Diff line change
Expand Up @@ -16,9 +16,9 @@ BEDTOOLS_DOWNLOAD_FILENAME="bedtools-${BEDTOOLS_VERSION}.tar.gz"
BEDTOOLS_URL="https://github.com/arq5x/bedtools2/releases/download/v${BEDTOOLS_VERSION}/${BEDTOOLS_DOWNLOAD_FILENAME}"

CDHIT_SHORT_VERSION="4.6.8"
CDHIT_LONG_VERSION="4.6.8-2017-0621-source"
CDHIT_LONG_VERSION="4.6.8-2017-0621"
CDHIT_DOWNLOAD_FILENAME="cd-hit-${CDHIT_SHORT_VERSION}.tar.gz"
CDHIT_URL="https://github.com/weizhongli/cdhit/releases/download/V${CDHIT_SHORT_VERSION}/cd-hit-v${CDHIT_LONG_VERSION}.tar.gz"
CDHIT_URL="https://github.com/weizhongli/cdhit/releases/download/V${CDHIT_SHORT_VERSION}/cd-hit-v${CDHIT_LONG_VERSION}-source.tar.gz"

PRANK_VERSION="0.140603"
PRANK_DOWNLOAD_FILENAME="prank-msa-master.tar.gz"
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