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Install galaxy2cwl, cwltool etc.
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stain committed Apr 8, 2020
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7 changes: 2 additions & 5 deletions Dockerfile
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Expand Up @@ -26,11 +26,8 @@ USER www-data

WORKDIR $APP_DIR

# CWL dependencies
RUN pip3 install cwltool html5lib
# To convert Galaxy to CWL
#RUN pip3 install --index-url https://test.pypi.org/simple/ galaxy2cwl # --extra-index-url https://pypi.org/simple
RUN pip3 install -i https://test.pypi.org/simple/ galaxy2cwl==0.1.1
# CWL dependencies, galaxy2cwl
RUN pip3 install cwltool==3.0.20200324120055 html5lib==1.0.1 galaxy2cwl==0.1.4


# Bundle install throw errors if Gemfile has been modified since Gemfile.lock
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