Release version 1.5.0 #751
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* fix remaining annotations to new-style * Add required import rule
* add and register new pytest flag * disable geopedia tests in ci
* separate lazy-loading mechanism from actual loading * move gzip functionality to separate subclass * separate file-ending checks * reorder decorators * switch away from mimetypes for extensions * add forgotten test fix * rename to `_check_path_extension`
* add zarr extra * add the FeatureIOZarr * reorder and expand error message * improve fs switching * add zarr flags to appropriate methods * remove redundant defaults * adapt tests to also check for zarr * make `remove_redundant_files` more blackboxy for the greater good * add test for checking that numpy and zarr files overwrite eachother * add test that different bakends still detect collisions * fix S3 issues * add test that ensures that mixed eopatches load properly * add zarr tests to 3.9 * add missing annotation * try different approach to CI * add missing skips * Update core/eolearn/core/eodata_io.py Co-authored-by: Matic Lubej <[email protected]> * use utility for getting full path from filesystem * add utility for path splitting * use the utility function * fix double . issue --------- Co-authored-by: Matic Lubej <[email protected]>
* add tests for partial loading * add test for merging * propagate temporal selection all the way to the FeatureIO objects * make test cover all types * implement partial loading * adjust comment to avoid pylint * remove test that is outside current scope * fix test so ti works :D * Update core/eolearn/tests/test_eodata_merge.py Co-authored-by: Matic Lubej <[email protected]> --------- Co-authored-by: Matic Lubej <[email protected]>
* add some basic tests * adjust tests with new knowledge * extend EOPatch signature * make passing arguments easier * refactor saving * remove partial saving stuff, future MR * some final polish
* add tests * propagate parameters to right locations * fix consolidate_timestamps * make it work for zarr * fix chunkies and make it work on S3 * last adjustments * remove unneeded parameters
* rename old approach * make it work * add test * clean up old-style files at save * final polish * add another meta_info test case
* adjust times and add explicit getter * remove issues outside of merging * fix timestamp consolidation * fix merging * fix type issues * add custom message. * Apply suggestions from code review Co-authored-by: Matic Lubej <[email protected]> * fix merging edgecase and add test * apply linters --------- Co-authored-by: Matic Lubej <[email protected]>
* add parameters to methods and core tasks * revert save_timestamps option for future MR * refactor load_eopatch_content
* thread parameters into functions * add tesst * add test for loading * implement for saving * fix loading * also do adjustments for copy tasks
* Adjust statistics for clustering in 3.11 * apply to 3.10 as well * apparently on 3.8 is same * apparently messed something up in the initial testing * finally fix 3.8 issue
* implement checkers * fix more warnings in tests * add more tests and fix init * upgrade tests a bit further * get rid of the annoying REFERENCE_SCENES in the test patch * specialize warning * fix remaining tests in core * remove warnings from raster_io * remove rest of warnings * remove default value for temporal dim * updating the temporal dim skips validation for timeless dicts * remove redundant ignore-warnings * Update core/eolearn/tests/test_core_tasks.py Co-authored-by: Matic Lubej <[email protected]> --------- Co-authored-by: Matic Lubej <[email protected]>
* extend types in core functions * add test * implement * fix type issues * extract function * avoid double loading of timestamps * add option to infer when partially saving * correct annotation
* add test that detects bug * apply patch
* add test * improve and fix test * add implementation * rename InferredSelection to TemporalSelection
* deprecate deepcopytask * deprecate some interpolation tasks * deprecate superpixel tasks
* fix lightgbm version * correct types in cloud mask task * remove redundant annotation
* add requirement to mask requirements * use utility from s2cloudless, remove unnecessary methods * add s2c requirement to pyproject.toml
* add test for explicit loading of nonexistant timestamps * fix implementation
* introduce Feature type alias * fix meteoblue (issue due to nonstandard import)
* adjust the core example * update time-lapse notebook * adjust io example * remove bbox plotting in visualization example * adjust mask and land-cover examples * Reer * minor edits --------- Co-authored-by: Matic Lubej <[email protected]>
…730) * add test * implement * fix docs
* update tests for erosion * add morphological filter regression tasks * remove usage of skimage in morphology * update tests --------- Co-authored-by: Ziga Luksic <[email protected]>
* use cv2_disk from s2cloudless, remove unnecessary code * use cv2_disk from cv2 for snow masking * fix types after change * revert legacy task
* Inline **kwargs in sampling * Inline kwargs for tiff tasks
* remove compress_level parameter from usable functions * update savers, hard-code compression values * remove compression param from tests * fix compression-related tests * formatting + linters * add deprecation warnings when `compress_level` param is used * add test for compression deprecation * add test for compression cleanup and backwards compatibility * review comments * add backwards compatibility test for loading uncompressed data
* remove redundant versions * process features extras * process mask extras * fix pyproject extra
* prepare core * adjust remaining READMEs * adjust installed subpackages * slight tweaks to setup.py files * correct setup.py and remove interpackage deps * detect deprecated packages
* remove features tasks * clean geometry * clean ml_tools * clean geometry and mask * clean io * remove meteoblue * adjust requirements and remove lgbm models * remove geopedia task as well * remove sen2core * remove ClassifierType
…744) * inline `BaseVectorImportTask` * remove deprecated `ml_tools.utils`
* updates to the eo-learn readme * readme improvements * update extra dependency list, mention extra-tasks in eo-learn-examples * Update README.md Co-authored-by: Žiga Lukšič <[email protected]> * resolve review comments * remove brackets * shorten list --------- Co-authored-by: Žiga Lukšič <[email protected]>
…#746) * make sure extra submodules are included when collecting list of tasks * add deprecation note into docstrings * fix copy task docstring
* simplify extras * update version * correct error messages * add changelog info
Codecov ReportPatch coverage:
❗ Your organization is not using the GitHub App Integration. As a result you may experience degraded service beginning May 15th. Please install the GitHub App Integration for your organization. Read more. Additional details and impacted files@@ Coverage Diff @@
## master #751 +/- ##
==========================================
+ Coverage 88.79% 92.38% +3.59%
==========================================
Files 57 41 -16
Lines 5454 4270 -1184
==========================================
- Hits 4843 3945 -898
+ Misses 611 325 -286
☔ View full report in Codecov by Sentry. |
* avoid underscore in extras * switch to single extra extra --------- Co-authored-by: Ziga Luksic <[email protected]>
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