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0.6.2 release
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sigven committed Jun 30, 2021
1 parent 65b2664 commit baa0668
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266 changes: 141 additions & 125 deletions README.md

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4 changes: 2 additions & 2 deletions conda_pkg/README.md
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Expand Up @@ -36,8 +36,8 @@ conda install --use-local $CHANNELS cpsr
For both alternatives you also need to download the reference data bundle for your genome build:

```
wget http://insilico.hpc.uio.no/pcgr/pcgr.databundle.20201123.grch37.tar.gz -O grch37.tar.gz
wget http://insilico.hpc.uio.no/pcgr/pcgr.databundle.20201123.grch38.tar.gz -O grch38.tar.gz
wget http://insilico.hpc.uio.no/pcgr/pcgr.databundle.grch37.20210627.tgz -O grch37.tgz
wget http://insilico.hpc.uio.no/pcgr/pcgr.databundle.grch38.20210627.tgz -O grch38.tgz
tar -xzf grch37.tar.gz # will extract into ./data/grch37/
tar -xzf grch38.tar.gz # will extract into ./data/grch38/
```
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2 changes: 1 addition & 1 deletion conda_pkg/cpsr/meta.yaml
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Expand Up @@ -13,7 +13,7 @@ build:

requirements:
run:
- pcgr >=0.9.1
- pcgr >=0.9.2

test:
commands:
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380 changes: 198 additions & 182 deletions cpsr.py

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40 changes: 0 additions & 40 deletions cpsr.toml

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217 changes: 0 additions & 217 deletions cpsr_exploratory_track.tsv

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84 changes: 0 additions & 84 deletions predisposition.Rmd

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