Skip to content

Commit

Permalink
Built site for gh-pages
Browse files Browse the repository at this point in the history
  • Loading branch information
Quarto GHA Workflow Runner committed Nov 24, 2023
1 parent 457d349 commit 3dcddf8
Show file tree
Hide file tree
Showing 8 changed files with 470 additions and 425 deletions.
2 changes: 1 addition & 1 deletion .nojekyll
View file
Original file line number Diff line number Diff line change
@@ -1 +1 @@
20822a39
10f7f294
18 changes: 9 additions & 9 deletions chapter_10.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -854,16 +854,16 @@ <h3 data-number="6.3.1" class="anchored" data-anchor-id="interventions-for-coron
plus standard error of the mean:

Mean SD Naive SE Time-series SE
d.STD.REM -0.1065 0.09808 0.0005663 0.0008046
d.STD.TOCI -0.1121 0.08177 0.0004721 0.0008786
sd.d 0.1117 0.08670 0.0005006 0.0017016
d.STD.REM -0.1070 0.09687 0.0005593 0.0007884
d.STD.TOCI -0.1119 0.08258 0.0004768 0.0008304
sd.d 0.1122 0.08608 0.0004970 0.0017143

2. Quantiles for each variable:

2.5% 25% 50% 75% 97.5%
d.STD.REM -0.318606 -0.15967 -0.10277 -0.04958 0.08610
d.STD.TOCI -0.256438 -0.16289 -0.11923 -0.06945 0.07634
sd.d 0.004353 0.04436 0.09359 0.15819 0.32473</code></pre>
d.STD.REM -0.311299 -0.16110 -0.10389 -0.05106 0.08548
d.STD.TOCI -0.256925 -0.16347 -0.11929 -0.06926 0.08092
sd.d 0.004401 0.04555 0.09467 0.15862 0.32142</code></pre>
</div>
</div>
<p>The corresponding odds ratios are as follows:</p>
Expand Down Expand Up @@ -1336,12 +1336,12 @@ <h3 data-number="6.3.3" class="anchored" data-anchor-id="advanced-therapies-for-
<span id="cb24-5"><a href="#cb24-5" aria-hidden="true" tabindex="-1"></a>sucra.uc<span class="sc">$</span>ranking.random</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
<div class="cell-output cell-output-stdout">
<pre><code> ADA160/80 FIL100 FIL200 GOL200/100 INF10 INF5 OZA0.92
0.27000000 0.16363636 0.46727273 0.63727273 0.57272727 0.75636364 0.75363636
0.26090909 0.18909091 0.40363636 0.59545455 0.60909091 0.74090909 0.77727273
PBO TOF10 UPA45 UST6 VED300
0.02090909 0.38909091 0.96727273 0.37000000 0.63181818 </code></pre>
0.02090909 0.40636364 0.98727273 0.40727273 0.60181818 </code></pre>
</div>
</div>
<p>These results indicate that 96.7% of the evaluated treatments are worse than <code>UPA45</code>.</p>
<p>These results indicate that 98.7% of the evaluated treatments are worse than <code>UPA45</code>.</p>
</section>
</section>
<section id="version-info" class="level2 unnumbered">
Expand Down
66 changes: 65 additions & 1 deletion chapter_11.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -246,6 +246,8 @@ <h2 id="toc-title">Table of contents</h2>
<li><a href="#individual-participant-data" id="toc-individual-participant-data" class="nav-link" data-scroll-target="#individual-participant-data"><span class="header-section-number">7.2.2</span> Individual participant data</a></li>
<li><a href="#hierarchical-metaregression" id="toc-hierarchical-metaregression" class="nav-link" data-scroll-target="#hierarchical-metaregression"><span class="header-section-number">7.2.3</span> Hierarchical metaregression</a></li>
</ul></li>
<li><a href="#version-info" id="toc-version-info" class="nav-link" data-scroll-target="#version-info">Version info</a></li>
<li><a href="#references" id="toc-references" class="nav-link" data-scroll-target="#references">References</a></li>
</ul>
</nav>
</div>
Expand Down Expand Up @@ -604,6 +606,69 @@ <h3 data-number="7.2.3" class="anchored" data-anchor-id="hierarchical-metaregres
</div>
</div>
</div>
</section>
</section>
<section id="version-info" class="level2 unnumbered">
<h2 class="unnumbered anchored" data-anchor-id="version-info">Version info</h2>
<p>This chapter was rendered using the following version of R and its packages:</p>
<div class="cell" data-hash="chapter_11_cache/html/unnamed-chunk-8_097e9efc1fec5df7c7a25885223b5cef">
<div class="cell-output cell-output-stdout">
<pre><code>R version 4.2.3 (2023-03-15)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 22.04.3 LTS

Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.20.so

locale:
[1] LC_CTYPE=C.UTF-8 LC_NUMERIC=C LC_TIME=C.UTF-8
[4] LC_COLLATE=C.UTF-8 LC_MONETARY=C.UTF-8 LC_MESSAGES=C.UTF-8
[7] LC_PAPER=C.UTF-8 LC_NAME=C LC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] ggplot2_3.4.4 meta_6.5-0 jarbes_2.0.0 dplyr_1.1.4
[5] table1_1.4.3 kableExtra_1.3.4

loaded via a namespace (and not attached):
[1] httr_1.4.7 tidyr_1.3.0 sfsmisc_1.1-16
[4] jsonlite_1.8.7 viridisLite_0.4.2 splines_4.2.3
[7] Formula_1.2-5 shiny_1.8.0 metafor_4.4-0
[10] yaml_2.3.7 numDeriv_2016.8-1.1 R2WinBUGS_2.1-21
[13] pillar_1.9.0 lattice_0.20-45 glue_1.6.2
[16] digest_0.6.33 RColorBrewer_1.1-3 promises_1.2.1
[19] minqa_1.2.6 rvest_1.0.3 colorspace_2.1-0
[22] R2jags_0.7-1 Matrix_1.6-3 mcmcplots_0.4.3
[25] htmltools_0.5.7 httpuv_1.6.12 plyr_1.8.9
[28] pkgconfig_2.0.3 purrr_1.0.2 xtable_1.8-4
[31] scales_1.2.1 webshot_0.5.5 svglite_2.1.2
[34] rjags_4-14 later_1.3.1 ggstats_0.5.1
[37] metadat_1.2-0 lme4_1.1-35.1 tibble_3.2.1
[40] farver_2.1.1 generics_0.1.3 ellipsis_0.3.2
[43] withr_2.5.2 cli_3.6.1 magrittr_2.0.3
[46] mime_0.12 evaluate_0.23 GGally_2.2.0
[49] fansi_1.0.5 nlme_3.1-162 MASS_7.3-58.2
[52] xml2_1.3.5 tools_4.2.3 lifecycle_1.0.4
[55] stringr_1.5.1 munsell_0.5.0 compiler_4.2.3
[58] systemfonts_1.0.5 rlang_1.1.2 nloptr_2.0.3
[61] grid_4.2.3 rstudioapi_0.15.0 CompQuadForm_1.4.3
[64] htmlwidgets_1.6.3 miniUI_0.1.1.1 labeling_0.4.3
[67] rmarkdown_2.25 boot_1.3-28.1 gtable_0.3.4
[70] codetools_0.2-19 abind_1.4-5 R6_2.5.1
[73] gridExtra_2.3 knitr_1.45 denstrip_1.5.4
[76] fastmap_1.1.1 utf8_1.2.4 mathjaxr_1.6-0
[79] ggExtra_0.10.1 stringi_1.8.2 parallel_4.2.3
[82] Rcpp_1.0.11 vctrs_0.6.4 tidyselect_1.2.0
[85] xfun_0.41 coda_0.19-4 </code></pre>
</div>
</div>
</section>
<section id="references" class="level2 unnumbered">
<h2 class="unnumbered anchored" data-anchor-id="references">References</h2>


<div id="refs" class="references csl-bib-body hanging-indent" role="list">
Expand All @@ -612,7 +677,6 @@ <h3 data-number="7.2.3" class="anchored" data-anchor-id="hierarchical-metaregres
</div>
</div>
</section>
</section>

</main> <!-- /main -->
<script id="quarto-html-after-body" type="application/javascript">
Expand Down
Loading

0 comments on commit 3dcddf8

Please sign in to comment.