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Quarto GHA Workflow Runner committed Mar 11, 2024
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2 changes: 1 addition & 1 deletion .nojekyll
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28 changes: 25 additions & 3 deletions authors.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>

<meta charset="utf-8">
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<meta name="generator" content="quarto-1.4.551">

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

Expand Down Expand Up @@ -417,6 +417,24 @@ <h1 class="title"><span class="chapter-number">11</span>&nbsp; <span class="chap
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Expand Down Expand Up @@ -451,7 +469,11 @@ <h1 class="title"><span class="chapter-number">11</span>&nbsp; <span class="chap
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Expand Down Expand Up @@ -727,7 +749,7 @@ <h1 class="title"><span class="chapter-number">11</span>&nbsp; <span class="chap
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<nav class="page-navigation">
<div class="nav-page nav-page-previous">
<a href="./chapter_18.html" class="pagination-link aria-label=" &lt;span="" and="" interpretation="" of="" individualized="" treatment="" rule="" results&lt;="" span&gt;"="">
<a href="./chapter_18.html" class="pagination-link" aria-label="Visualization and interpretation of individualized treatment rule results">
<i class="bi bi-arrow-left-short"></i> <span class="nav-page-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Visualization and interpretation of individualized treatment rule results</span></span>
</a>
</div>
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44 changes: 35 additions & 9 deletions chapter_03.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>

<meta charset="utf-8">
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<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

Expand Down Expand Up @@ -287,6 +287,10 @@ <h2 data-number="2.1" class="anchored" data-anchor-id="example-code"><span class
<span id="cb2-3"><a href="#cb2-3" aria-hidden="true" tabindex="-1"></a><span class="co">#creation of traffic light plot</span></span>
<span id="cb2-4"><a href="#cb2-4" aria-hidden="true" tabindex="-1"></a>trafficlight_rob <span class="ot">&lt;-</span> <span class="fu">rob_traffic_light</span>(<span class="at">data =</span> Risk_of_Bias, <span class="at">tool =</span> <span class="st">"ROB2"</span>)</span>
<span id="cb2-5"><a href="#cb2-5" aria-hidden="true" tabindex="-1"></a>trafficlight_rob</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
<div class="cell-output cell-output-stderr">
<pre><code>Warning in ggplot2::geom_point(shape = 1, colour = "black", size = psize, : All aesthetics have length 1, but the data has 204 rows.
ℹ Did you mean to use `annotate()`?</code></pre>
</div>
<div class="cell-output-display">
<div>
<figure class="figure">
Expand All @@ -303,7 +307,7 @@ <h2 class="unnumbered anchored" data-anchor-id="version-info">Version info</h2>
<div class="cell-output cell-output-stdout">
<pre><code>R version 4.2.3 (2023-03-15)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 22.04.3 LTS
Running under: Ubuntu 22.04.4 LTS

Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
Expand All @@ -322,14 +326,14 @@ <h2 class="unnumbered anchored" data-anchor-id="version-info">Version info</h2>
[1] robvis_0.3.0 readxl_1.4.3

loaded via a namespace (and not attached):
[1] knitr_1.45 magrittr_2.0.3 munsell_0.5.0 tidyselect_1.2.0
[1] knitr_1.45 magrittr_2.0.3 munsell_0.5.0 tidyselect_1.2.1
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[13] gtable_0.3.4 xfun_0.42 utf8_1.2.4 cli_3.6.2
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[21] tibble_3.2.1 lifecycle_1.0.4 farver_2.1.1 ggplot2_3.4.4
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[21] tibble_3.2.1 lifecycle_1.0.4 farver_2.1.1 ggplot2_3.5.0
[25] purrr_1.0.2 tidyr_1.3.1 htmlwidgets_1.6.4 vctrs_0.6.5
[29] codetools_0.2-19 glue_1.7.0 evaluate_0.23 rmarkdown_2.25
[29] codetools_0.2-19 glue_1.7.0 evaluate_0.23 rmarkdown_2.26
[33] compiler_4.2.3 pillar_1.9.0 cellranger_1.1.0 scales_1.3.0
[37] generics_0.1.3 jsonlite_1.8.8 pkgconfig_2.0.3 </code></pre>
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Expand Down Expand Up @@ -418,6 +422,24 @@ <h2 class="unnumbered anchored" data-anchor-id="version-info">Version info</h2>
// clear code selection
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var localhostRegex = new RegExp(/^(?:http|https):\/\/localhost\:?[0-9]*\//);
var mailtoRegex = new RegExp(/^mailto:/);
var filterRegex = new RegExp('/' + window.location.host + '/');
var isInternal = (href) => {
return filterRegex.test(href) || localhostRegex.test(href) || mailtoRegex.test(href);
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// Inspect non-navigation links and adorn them if external
var links = window.document.querySelectorAll('a[href]:not(.nav-link):not(.navbar-brand):not(.toc-action):not(.sidebar-link):not(.sidebar-item-toggle):not(.pagination-link):not(.no-external):not([aria-hidden]):not(.dropdown-item):not(.quarto-navigation-tool)');
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// undo the damage that might have been done by quarto-nav.js in the case of
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const config = {
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Expand Down Expand Up @@ -452,7 +474,11 @@ <h2 class="unnumbered anchored" data-anchor-id="version-info">Version info</h2>
try { href = new URL(href).hash; } catch {}
const id = href.replace(/^#\/?/, "");
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const xrefs = window.document.querySelectorAll('a.quarto-xref');
Expand Down Expand Up @@ -728,12 +754,12 @@ <h2 class="unnumbered anchored" data-anchor-id="version-info">Version info</h2>
</script>
<nav class="page-navigation">
<div class="nav-page nav-page-previous">
<a href="./index.html" class="pagination-link aria-label=" &lt;span="">
<a href="./index.html" class="pagination-link" aria-label="Preface">
<i class="bi bi-arrow-left-short"></i> <span class="nav-page-text"><span class="chapter-number">1</span>&nbsp; <span class="chapter-title">Preface</span></span>
</a>
</div>
<div class="nav-page nav-page-next">
<a href="./chapter_06.html" class="pagination-link" aria-label="<span class='chapter-number'>3</span>&nbsp; <span class='chapter-title'>Confounding adjustment using propensity score methods</span>">
<a href="./chapter_06.html" class="pagination-link" aria-label="Confounding adjustment using propensity score methods">
<span class="nav-page-text"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">Confounding adjustment using propensity score methods</span></span> <i class="bi bi-arrow-right-short"></i>
</a>
</div>
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46 changes: 34 additions & 12 deletions chapter_06.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>

<meta charset="utf-8">
<meta name="generator" content="quarto-1.4.549">
<meta name="generator" content="quarto-1.4.551">

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

Expand Down Expand Up @@ -55404,7 +55404,7 @@ <h2 class="unnumbered anchored" data-anchor-id="version-info">Version info</h2>
<div class="cell-output cell-output-stdout">
<pre><code>R version 4.2.3 (2023-03-15)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 22.04.3 LTS
Running under: Ubuntu 22.04.4 LTS

Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
Expand All @@ -55423,25 +55423,25 @@ <h2 class="unnumbered anchored" data-anchor-id="version-info">Version info</h2>
other attached packages:
[1] WeightIt_0.14.2 boot_1.3-28.1 MatchIt_4.5.5
[4] sandwich_3.1-0 truncnorm_1.0-9 tableone_0.13.2
[7] survey_4.2-1 survival_3.5-3 Matrix_1.6-5
[7] survey_4.4-1 survival_3.5-3 Matrix_1.6-5
[10] MASS_7.3-58.2 marginaleffects_0.18.0 lmtest_0.9-40
[13] zoo_1.8-12 knitr_1.45 ggplot2_3.4.4
[16] data.table_1.15.0 cobalt_4.5.3 dplyr_1.1.4
[13] zoo_1.8-12 knitr_1.45 ggplot2_3.5.0
[16] data.table_1.15.2 cobalt_4.5.4 dplyr_1.1.4

loaded via a namespace (and not attached):
[1] tidyselect_1.2.0 xfun_0.42 mitools_2.4 haven_2.5.4
[1] tidyselect_1.2.1 xfun_0.42 mitools_2.4 haven_2.5.4
[5] splines_4.2.3 lattice_0.20-45 labelled_2.12.0 colorspace_2.1-0
[9] vctrs_0.6.5 generics_0.1.3 htmltools_0.5.7 yaml_2.3.8
[13] utf8_1.2.4 rlang_1.1.3 e1071_1.7-14 pillar_1.9.0
[17] glue_1.7.0 withr_3.0.0 DBI_1.2.1 lifecycle_1.0.4
[17] glue_1.7.0 withr_3.0.0 DBI_1.2.2 lifecycle_1.0.4
[21] munsell_0.5.0 gtable_0.3.4 htmlwidgets_1.6.4 codetools_0.2-19
[25] evaluate_0.23 labeling_0.4.3 forcats_1.0.0 fastmap_1.1.1
[29] class_7.3-21 fansi_1.0.6 optmatch_0.10.7 Rcpp_1.0.12
[33] checkmate_2.3.1 backports_1.4.1 scales_1.3.0 jsonlite_1.8.8
[37] farver_2.1.1 chk_0.9.1 hms_1.1.3 digest_0.6.34
[37] farver_2.1.1 chk_0.9.1 hms_1.1.3 digest_0.6.35
[41] insight_0.19.8 cli_3.6.2 tools_4.2.3 magrittr_2.0.3
[45] proxy_0.4-27 tibble_3.2.1 crayon_1.5.2 pkgconfig_2.0.3
[49] rlemon_0.2.1 rmarkdown_2.25 R6_2.5.1 compiler_4.2.3 </code></pre>
[49] rlemon_0.2.1 rmarkdown_2.26 R6_2.5.1 compiler_4.2.3 </code></pre>
</div>
</div>
</section>
Expand Down Expand Up @@ -55531,6 +55531,24 @@ <h2 class="unnumbered anchored" data-anchor-id="references">References</h2>
// clear code selection
e.clearSelection();
});
var localhostRegex = new RegExp(/^(?:http|https):\/\/localhost\:?[0-9]*\//);
var mailtoRegex = new RegExp(/^mailto:/);
var filterRegex = new RegExp('/' + window.location.host + '/');
var isInternal = (href) => {
return filterRegex.test(href) || localhostRegex.test(href) || mailtoRegex.test(href);
}
// Inspect non-navigation links and adorn them if external
var links = window.document.querySelectorAll('a[href]:not(.nav-link):not(.navbar-brand):not(.toc-action):not(.sidebar-link):not(.sidebar-item-toggle):not(.pagination-link):not(.no-external):not([aria-hidden]):not(.dropdown-item):not(.quarto-navigation-tool)');
for (var i=0; i<links.length; i++) {
const link = links[i];
if (!isInternal(link.href)) {
// undo the damage that might have been done by quarto-nav.js in the case of
// links that we want to consider external
if (link.dataset.originalHref !== undefined) {
link.href = link.dataset.originalHref;
}
}
}
function tippyHover(el, contentFn, onTriggerFn, onUntriggerFn) {
const config = {
allowHTML: true,
Expand Down Expand Up @@ -55565,7 +55583,11 @@ <h2 class="unnumbered anchored" data-anchor-id="references">References</h2>
try { href = new URL(href).hash; } catch {}
const id = href.replace(/^#\/?/, "");
const note = window.document.getElementById(id);
return note.innerHTML;
if (note) {
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return "";
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const xrefs = window.document.querySelectorAll('a.quarto-xref');
Expand Down Expand Up @@ -55841,12 +55863,12 @@ <h2 class="unnumbered anchored" data-anchor-id="references">References</h2>
</script>
<nav class="page-navigation">
<div class="nav-page nav-page-previous">
<a href="./chapter_03.html" class="pagination-link aria-label=" &lt;span="" control="" and="" quality="" assessment="" of="" real-world="" data="" evidence&lt;="" span&gt;"="">
<a href="./chapter_03.html" class="pagination-link" aria-label="Validity control and quality assessment of real-world data and real-world evidence">
<i class="bi bi-arrow-left-short"></i> <span class="nav-page-text"><span class="chapter-number">2</span>&nbsp; <span class="chapter-title">Validity control and quality assessment of real-world data and real-world evidence</span></span>
</a>
</div>
<div class="nav-page nav-page-next">
<a href="./chapter_07.html" class="pagination-link" aria-label="<span class='chapter-number'>4</span>&nbsp; <span class='chapter-title'>Effect Modification Analysis within the Propensity score Framework</span>">
<a href="./chapter_07.html" class="pagination-link" aria-label="Effect Modification Analysis within the Propensity score Framework">
<span class="nav-page-text"><span class="chapter-number">4</span>&nbsp; <span class="chapter-title">Effect Modification Analysis within the Propensity score Framework</span></span> <i class="bi bi-arrow-right-short"></i>
</a>
</div>
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