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Update README.md
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andrewdavidsmith authored Sep 5, 2022
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Expand Up @@ -5,13 +5,13 @@ to examine the utility of further sequencing, optimize the sequencing
depth, or to screen multiple libraries to avoid low complexity
samples.

SYSTEM REQUIREMENTS:
SYSTEM REQUIREMENTS
========================================================================
The preseq software will only run on 64-bit UNIX-like operating
systems and was developed on both Linux and Mac. The preseq software
requires a C++ compiler that supports C++11.

INSTALLATION:
INSTALLATION
========================================================================
### Installing from a release

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The HTSLib library can be obtained here:
http://www.htslib.org/download.

INPUT FILE FORMATS:
INPUT FILE FORMATS
========================================================================
The input to preseq can be in 3 general formats:
1. Mapped read locations in BED or BAM file format. The file should be
Expand All @@ -84,7 +84,7 @@ The input to preseq can be in 3 general formats:
line. These will be made into the "counts histogram" inside preseq
right away.

USAGE EXAMPLES:
USAGE EXAMPLES
========================================================================
Each program included in this software package will print a list of
options if executed without any command line arguments. Many of the
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