Update peter-evans/create-pull-request action to v6 #39
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: CI with GNU parallel | |
on: | |
workflow_dispatch: | |
push: | |
branches: [main] | |
pull_request: | |
branches: [main] | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
env: | |
NJOBS: '4' | |
TIMEOUT: '-1' # nbconvert timeout | |
EXTRA_ARGS: '' # Extra arguments for nbconvert | |
CACHE_NUM: '1' | |
JULIA_CONDAPKG_BACKEND: 'Null' | |
JULIA_CI: 'true' | |
PY_VER: '3.12' | |
jobs: | |
CI: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v4 | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
id: cp | |
with: | |
python-version: ${{ env.PY_VER }} | |
cache: 'pip' | |
- name: Install python packages | |
run: pip install -r requirements.txt | |
- name: Read Julia version | |
uses: SebRollen/[email protected] | |
id: read_toml | |
with: | |
file: 'Manifest.toml' | |
field: 'julia_version' | |
- name: Setup Julia | |
uses: julia-actions/setup-julia@v1 | |
with: | |
version: ${{ steps.read_toml.outputs.value }} | |
show-versioninfo: 'true' | |
- name: Cache Julia packages | |
uses: actions/cache@v4 | |
id: cache-julia | |
with: | |
save-always: 'true' | |
path: | | |
~/.julia | |
!~/.julia/registries | |
key: ${{ runner.os }}-julia-${{ env.CACHE_NUM }}-${{ hashFiles('src/**','Project.toml', 'Manifest.toml')}} | |
restore-keys: | | |
${{ runner.os }}-julia-${{ env.CACHE_NUM }}- | |
- name: Install Julia packages | |
if: ${{ steps.cache-julia.outputs.cache-hit != 'true' }} | |
shell: julia --color=yes {0} | |
run: | | |
using Pkg, Dates | |
Pkg.add(["IJulia"]) | |
Pkg.activate(".") | |
Pkg.instantiate() | |
Pkg.precompile() | |
Pkg.gc(collect_delay=Day(0)) | |
- name: Install IJulia kernel | |
run: julia --color=yes -e 'using IJulia; installkernel("Julia", "--project=@.")' | |
- name: Execute Notebooks | |
run: > | |
find docs -type f -name '*.ipynb' | | |
parallel --joblog /tmp/job.log -j${NJOBS} jupyter nbconvert --to notebook --execute --inplace ${{ env.EXTRA_ARGS }} | |
--ExecutePreprocessor.timeout=${{ env.TIMEOUT }} | |
--ExecutePreprocessor.kernel_name=julia-1.$(julia -e 'print(VERSION.minor)') | |
{} | |
- name: Show execution stats | |
run: cat /tmp/job.log | |
- name: Build website | |
run: jupyter-book build docs/ | |
- name: Upload pages artifact | |
if: ${{ github.ref == 'refs/heads/main' }} | |
uses: actions/upload-pages-artifact@v3 | |
with: | |
path: docs/_build/html/ | |
# Deploy pages | |
deploy: | |
needs: CI | |
if: ${{ github.ref == 'refs/heads/main' }} | |
# Grant GITHUB_TOKEN the permissions required to make a Pages deployment | |
permissions: | |
pages: write # to deploy to Pages | |
id-token: write # to verify the deployment originates from an appropriate source | |
actions: read # to download an artifact uploaded by `actions/upload-pages-artifact@v3` | |
environment: | |
name: github-pages | |
url: ${{ steps.deployment.outputs.page_url }} | |
runs-on: ubuntu-latest | |
steps: | |
- name: Deploy to GitHub Pages | |
id: deployment | |
uses: actions/deploy-pages@v4 |