CI title #81
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name: CI | |
on: | |
workflow_dispatch: | |
push: | |
branches: [main] | |
pull_request: | |
branches: [main] | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
env: | |
NBCONVERT_JOBS: '4' | |
LITERATE_PROC: '2' | |
EXTRA_ARGS: '' # Extra arguments for nbconvert | |
CACHE_NUM: '3' | |
JULIA_CONDAPKG_BACKEND: 'Null' | |
JULIA_CI: 'true' | |
NBCACHE: '.cache' | |
jobs: | |
CI: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v4 | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
id: cp | |
with: | |
python-version: '3.x' | |
- name: Cache pip dependencies | |
uses: actions/cache@v4 | |
id: cache-py | |
with: | |
path: ${{ env.pythonLocation }} | |
key: ${{ runner.os }}-pip-${{ steps.cp.outputs.python-version }}-${{ hashFiles('requirements.txt') }} | |
- name: Install pip dependencies if cache miss | |
if: ${{ steps.cache-py.outputs.cache-hit != 'true' }} | |
run: pip install -r requirements.txt | |
- name: Cache executed notebooks | |
uses: actions/cache@v4 | |
id: cache-nb | |
with: | |
path: ${{ env.NBCACHE }} | |
key: ${{ runner.os }}-nb-${{ env.CACHE_NUM }}-${{ hashFiles('src/**', 'Project.toml', 'Manifest.toml') }}-${{ hashFiles('docs/**/*.ipynb', 'docs/**/*.jl') }} | |
restore-keys: | | |
${{ runner.os }}-nb-${{ env.CACHE_NUM }}-${{ hashFiles('src/**', 'Project.toml', 'Manifest.toml') }}- | |
- name: Read Julia version | |
uses: SebRollen/[email protected] | |
id: read_toml | |
with: | |
file: 'Manifest.toml' | |
field: 'julia_version' | |
- name: Setup Julia | |
uses: julia-actions/setup-julia@v1 | |
with: | |
version: ${{ steps.read_toml.outputs.value }} | |
show-versioninfo: 'true' | |
- name: Restore Julia packages | |
uses: actions/cache/restore@v4 | |
id: cache-julia | |
with: | |
path: | | |
~/.julia | |
!~/.julia/registries | |
key: ${{ runner.os }}-julia-${{ env.CACHE_NUM }}-${{ hashFiles('src/**', 'Project.toml', 'Manifest.toml') }} | |
restore-keys: | | |
${{ runner.os }}-julia-${{ env.CACHE_NUM }}- | |
- name: Install Julia packages | |
if: ${{ steps.cache-julia.outputs.cache-hit != 'true' }} | |
env: | |
PYTHON: ${{ env.pythonLocation }}/python | |
run: julia --color=yes instantiate.jl | |
- name: Save Julia packages | |
uses: actions/cache/save@v4 | |
if: ${{ steps.cache-julia.outputs.cache-hit != 'true' }} | |
with: | |
path: | | |
~/.julia | |
!~/.julia/registries | |
key: ${{ steps.cache-julia.outputs.cache-primary-key }} | |
- name: Install IJulia kernel and run literate notebooks | |
run: julia --color=yes -p ${{ env.LITERATE_PROC }} --heap-size-hint=4G literate.jl | |
- name: Execute Jupyter notebooks | |
run: > | |
parallel -a ipynbs.txt --joblog job.log -j ${{ env.NBCONVERT_JOBS }} jupyter nbconvert --to notebook | |
--execute ${{ env.EXTRA_ARGS }} | |
--ExecutePreprocessor.timeout=-1 | |
--ExecutePreprocessor.kernel_name=julia-1.$(julia -e 'print(VERSION.minor)') | |
--output ${{ github.workspace }}/${{ env.NBCACHE }}/{} | |
{} | |
- name: Show GUN parallel execution stats | |
run: cat job.log | |
- name: Copy back built notebooks | |
run: cp --verbose -rf ${{ env.NBCACHE }}/docs/* docs/ | |
- name: Build website | |
run: jupyter-book build docs/ | |
- name: Upload pages artifact | |
if: ${{ github.ref == 'refs/heads/main' }} | |
uses: actions/upload-pages-artifact@v3 | |
with: | |
path: docs/_build/html/ | |
# Deploy pages | |
deploy: | |
needs: CI | |
if: ${{ github.ref == 'refs/heads/main' }} | |
# Grant GITHUB_TOKEN the permissions required to make a Pages deployment | |
permissions: | |
pages: write # to deploy to Pages | |
id-token: write # to verify the deployment originates from an appropriate source | |
actions: read # to download an artifact uploaded by `actions/upload-pages-artifact@v3` | |
environment: | |
name: github-pages | |
url: ${{ steps.deployment.outputs.page_url }} | |
runs-on: ubuntu-latest | |
steps: | |
- name: Deploy to GitHub Pages | |
id: deployment | |
uses: actions/deploy-pages@v4 |