datatree accessor to multiscale spatial image #172
Workflow file for this run
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| name: Notebook tests | |
| on: [push, pull_request] | |
| jobs: | |
| run: | |
| runs-on: ubuntu-latest | |
| name: Test notebooks with nbmake | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v3 | |
| with: | |
| python-version: '3.9' | |
| - uses: actions/setup-java@v3 | |
| with: | |
| java-version: '8' | |
| distribution: 'zulu' | |
| - name: Install test dependencies | |
| run: | | |
| python3 -m pip install --upgrade pip | |
| python3 -m pip install -e ".[test]" | |
| python3 -m pip install pyimagej | |
| python3 -c "import imagej; ij = imagej.init('2.5.0'); print(ij.getVersion())" | |
| - name: Test notebooks | |
| run: | | |
| pytest --nbmake --nbmake-timeout=3000 examples/*ipynb |