This is about python tutorial lectures for my students

python implementations of bioinformatics algorithms to solve Rosalind problems

Different tasks from the field of data science applied on typical bioinformatic data. Mainly used packages are numpy and scipy and the code is organized in jupyter notebooks.

Bioinformatics libraries and notebooks with python and javascript

A couple of Python Jupyter Notebooks related to bioinformatics

This is a collection of Python scripts, which I created using Jupyter Notebook, where I practiced solving typical bioinformatics problems as a part of my Bioinformatics (2111) course! I learned the…

Here, I share notebooks, scripts and mardown files describing bioinformatics tools to analyse biological data.

This repository is for collect python codes and jupyter notebooks when I used to solve bioinformatics problems.

Colab Notebook for anyone want to start using Python with genomics and bioinformatics in DNA.

This repository contains my own coding solutions for the first 22 problems in bioinformatics stronghold section in Rosalind, all of these solutions are written in python programming language and al…

Official git repository for Biopython (originally converted from CVS)

My solutions to the assignments and projects of Machine Learning for Bioinformatics Course

This notebook does the analysis of a protein sequence dataset in FASTA format. It addresses challenges in data import, alignment, embedding, and classification using bioinformatics tools and machin…

This repository contains a Jupyter Notebook that demonstrates an analysis of COVID-19 genome sequences. The goal of this project is to identify mutations and potential targets for drugs based on th…

Purpose of this notebook was to identify and fix discrepancies between an internal dataset of spanin proteins which contained CDS calls that did not yield the expected protein sequence when transla…

12 days of Biopython is a collection of 12 videos explaining in details how to work with Biopython, a bioinformatics tool using a real life examples.

BioPython/scikit-bio tutorial for EuroSciPy 2018

👁️ Python library to plot DNA sequence features (e.g. from Genbank files)

A tutorial on making phylogenetic trees in python

Jupyter notebooks for introductory level bioinformatics

Notebooks from the course

Publicly available dataset for bioinformatics and integrative -omics research