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swaruplabUCI

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  1. ArchRtoSignac ArchRtoSignac Public

    An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)

    R 32 11

  2. DSAD_Spatial_Miyoshi_Morabito_2024 DSAD_Spatial_Miyoshi_Morabito_2024 Public

    Code associated with the data analysis for Miyoshi & Morabito 2023

    Jupyter Notebook 8

  3. FIRE-mouse-2021-paper FIRE-mouse-2021-paper Public

    Data processing and analysis code for SPLiT-seq in Shabestari et al FIRE mouse study.

    R 2

  4. Relapse-to-cocaine-seeking-is-regulated-by-medial-habenula-Nr4a2 Relapse-to-cocaine-seeking-is-regulated-by-medial-habenula-Nr4a2 Public

    Repository containing code used for snRNA-seq data analysis in Childs & Morabito et al. 2024 (Cell Reports, in press)

    Jupyter Notebook 2

  5. hdWGCNA hdWGCNA Public

    Forked from smorabit/hdWGCNA

    High dimensional weighted gene co-expression network analysis

    R 1

  6. Single-nuclei-epigenomic-and-transcriptomic-landscape-in-Alzheimer-disease Single-nuclei-epigenomic-and-transcriptomic-landscape-in-Alzheimer-disease Public

    Forked from swaruplab/Single-nuclei-epigenomic-and-transcriptomic-landscape-in-Alzheimer-disease

    Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease

    R 2

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