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  1. presentation-template presentation-template Public

    Simple presentation template.

    TeX 43 7

  2. biodivine-lib-bdd biodivine-lib-bdd Public

    A small library for BDD manipulation in Rust. Part of the BioDivine toolset.

    Rust 20 4

  3. biodivine-boolean-models biodivine-boolean-models Public

    A collection of 230+ Boolean networks from various sources useful for benchmarking or testing.

    TeX 12 3

  4. biodivine-aeon-py biodivine-aeon-py Public

    Jupyter Notebook 5 2

  5. huctl huctl Public

    HUCTLp is a temporal logic (based on CTL) designed for analysis of dynamical systems. This repository provides a format for representing HUCTLp formulas as text and as JVM objects.

    Kotlin 4

  6. parasim parasim Public

    Tool for paralell simulations and verification

    Java 3 1

Repositories

Showing 10 of 74 repositories
  • sybila/biodivine-control-tool’s past year of commit activity
    JavaScript 0 MIT 1 0 0 Updated Jan 20, 2025
  • arboreto Public Forked from aertslab/arboreto

    Internal fork for archival purposes.

    sybila/arboreto’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 30 0 0 Updated Jan 9, 2025
  • biodivine-lib-bdd Public

    A small library for BDD manipulation in Rust. Part of the BioDivine toolset.

    sybila/biodivine-lib-bdd’s past year of commit activity
    Rust 20 MIT 4 14 0 Updated Dec 23, 2024
  • biodivine-sketchbook Public

    Biodivine Sketchbook is a multi-platform application for designing and analysing large-scale logical models.

    sybila/biodivine-sketchbook’s past year of commit activity
    Rust 0 MIT 1 17 0 Updated Dec 15, 2024
  • biodivine-lib-sbml Public

    A Rust library for managing SBML files.

    sybila/biodivine-lib-sbml’s past year of commit activity
    Rust 1 MIT 0 16 (1 issue needs help) 0 Updated Dec 7, 2024
  • sybila/biodivine-aeon-py’s past year of commit activity
    Jupyter Notebook 5 MIT 2 9 1 Updated Nov 29, 2024
  • sybila/biodivine-pbn-control’s past year of commit activity
    Jupyter Notebook 0 MIT 0 1 0 Updated Nov 29, 2024
  • eBCSgen Public

    eBCSgen - BioChemical Space Language support tool.

    sybila/eBCSgen’s past year of commit activity
    JavaScript 2 MIT 4 23 1 Updated Nov 25, 2024
  • biodivine-aeon-server Public

    Aeon boolean network analyser server service

    sybila/biodivine-aeon-server’s past year of commit activity
    Rust 0 MIT 0 6 0 Updated Nov 19, 2024
  • biodivine-hctl-model-checker Public

    Symbolic HCTL model checker for Boolean networks

    sybila/biodivine-hctl-model-checker’s past year of commit activity
    Rust 0 MIT 0 3 0 Updated Nov 7, 2024

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