Fix some roxygen2 all.equal.dendrogram and all.equal.dendlist issues

NAMESPACE

@@ -10,8 +10,8 @@ S3method("labels<-",dendrogram)
 S3method("labels<-",dist)
 S3method("labels<-",hclust)
 S3method("labels<-",phylo)
-S3method(all,equal.dendlist)
-S3method(all,equal.dendrogram)
+S3method(all.equal,dendlist)
+S3method(all.equal,dendrogram)
 S3method(as.dendrogram,phylo)
 S3method(as.dendrogram,pvclust)
 S3method(as.dendrogram,varclus)

NEWS.md

@@ -1,5 +1,9 @@
 dendextend 1.19.0 (2024-11-12)
 ==============================
+## BUG FIXES
+- Fix some roxygen2 all.equal.dendrogram and all.equal.dendlist issues
+- Fix dendlist in some edge cases (see ed39cec8dde07cf80728bdc896ab3a0f35684e32)
+
 ## OTHER NOTES
 - Adding tests (props to @alecbuetow for all of his GREAT work), moving the test coverage from <40% to >95% !
    See: https://app.codecov.io/github/talgalili/dendextend?branch=master

R/all.equal.R

@@ -21,8 +21,8 @@
 
 
 #' @title Global Comparison of two (or more) dendrograms
-#' @exportS3Method all.equal dendlist
-#' @method all.equal dendlist
+#' @exportS3Method all.equal dendrogram
+#' @method all.equal dendrogram
 #' @aliases
 #' all.equal.dendlist
 #' @description
@@ -49,6 +49,16 @@
 #' Either TRUE (NULL for attr.all.equal) or a vector of mode "character" describing the differences
 #' between target and current.
 #'
+#' @usage \method{all.equal}{dendrogram}(target, current,
+#'                                      use.edge.length = TRUE,
+#'                                      use.tip.label.order = FALSE,
+#'                                      use.tip.label = TRUE,
+#'                                      use.topology = TRUE,
+#'                                      tolerance = .Machine$double.eps^0.5,
+#'                                      scale = NULL, ...)
+#'
+#' \method{all.equal}{dendlist}(target, current, ...)
+#'
 #' @examples
 #'
 #' \dontrun{
@@ -174,6 +184,8 @@ all.equal.dendrogram <- function(target, current,
 
 
 #' @export
+#' @exportS3Method all.equal dendlist
+#' @method all.equal dendlist
 all.equal.dendlist <- function(target, current, ...) {
   if (!is.dendlist(target)) stop("target needs to be a dendlist object")