Skip to content
MiniWDL Check

added 2 QC thresholds to ANI task to reduce false positives #588

Sign in to view logs

added 2 QC thresholds to ANI task to reduce false positives

added 2 QC thresholds to ANI task to reduce false positives #588

Run time

Learn about OS pricing on GitHub Actions
Job Run time
Check for changes
5s
tasks/alignment/task_minimap2.wdl
29s
tasks/assembly/task_ivar_consensus.wdl
27s
tasks/assembly/task_metaspades.wdl
22s
tasks/gene_typing/task_plasmidfinder.wdl
31s
tasks/phylogenetic_inference/augur/task_augur_align.wdl
28s
tasks/phylogenetic_inference/augur/task_augur_refine.wdl
33s
tasks/phylogenetic_inference/augur/task_augur_traits.wdl
32s
tasks/phylogenetic_inference/augur/task_augur_translate.wdl
25s
tasks/phylogenetic_inference/augur/task_augur_tree.wdl
27s
tasks/quality_control/task_fastq_scan.wdl
29s
tasks/quality_control/task_mummer_ani.wdl
44s
tasks/quality_control/task_ncbi_scrub.wdl
3m 14s
tasks/quality_control/task_pilon.wdl
28s
tasks/quality_control/task_quast.wdl
29s
tasks/quality_control/task_readlength.wdl
23s
tasks/quality_control/task_trimmomatic.wdl
26s
tasks/species_typing/task_clockwork.wdl
26s
tasks/species_typing/task_tbp_parser.wdl
29s
tasks/species_typing/task_tbprofiler.wdl
26s
tasks/species_typing/task_ts_mlst.wdl
26s
tasks/task_versioning.wdl
23s
tasks/taxon_id/task_kmerfinder.wdl
27s
tasks/taxon_id/task_kraken2.wdl
29s
tasks/taxon_id/task_nextclade.wdl
25s
tasks/utilities/task_augur_utilities.wdl
20s
tasks/utilities/task_broad_terra_tools.wdl
22s
tasks/utilities/task_czgenepi_wrangling.wdl
25s
tasks/utilities/task_download_terra_table.wdl
23s
tasks/utilities/task_kmc.wdl
30s
tasks/utilities/task_parse_mapping.wdl
21s
workflows/metagenomics/wf_theiameta_illumina_pe.wdl
26s
workflows/phylogenetics/wf_augur.wdl
25s
workflows/phylogenetics/wf_nextclade_addToRefTree.wdl
23s
workflows/phylogenetics/wf_snippy_tree.wdl
31s
workflows/theiaeuk/wf_theiaeuk_illumina_pe.wdl
35s
workflows/theiaprok/wf_theiaprok_fasta.wdl
28s
workflows/theiaprok/wf_theiaprok_illumina_pe.wdl
27s
workflows/theiaprok/wf_theiaprok_illumina_se.wdl
29s
workflows/theiaprok/wf_theiaprok_ont.wdl
32s
workflows/utilities/wf_czgenepi_prep.wdl
26s
workflows/utilities/wf_ivar_consensus.wdl
24s
workflows/utilities/wf_merlin_magic.wdl
29s
workflows/utilities/wf_metaspades_assembly.wdl
27s
workflows/utilities/wf_read_QC_trim_ont.wdl
25s
workflows/utilities/wf_read_QC_trim_pe.wdl
24s
23m 15s