TheiaCoV and TheiaProk workflows standardization & organism default subworkflow #852

Job	Run time
Check for changes	6s
wf_theiacov_clearlabs miniwdl	1m 54s
wf_theiacov_clearlabs cromwell	1m 51s
wf_theiacov_illumina_pe cromwell	2m 15s
wf_theiacov_illumina_se cromwell	1m 25s
wf_theiacov_ont miniwdl	3m 3s
wf_theiacov_ont cromwell	4m 24s
wf_theiaprok_illumina_pe miniwdl	1m 56s
wf_theiaprok_illumina_pe cromwell	2m 4s
wf_theiaprok_illumina_se miniwdl	2m 10s
wf_theiaprok_illumina_se cromwell	1m 23s
	22m 31s

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