Skip to content

Commit

Permalink
organize
Browse files Browse the repository at this point in the history
  • Loading branch information
sage-wright committed Nov 8, 2024
1 parent 604ecad commit bc9dc69
Show file tree
Hide file tree
Showing 2 changed files with 5 additions and 5 deletions.
6 changes: 3 additions & 3 deletions tasks/species_typing/mycobacterium/task_tbp_parser.wdl
Original file line number Diff line number Diff line change
Expand Up @@ -28,11 +28,11 @@ task tbp_parser {
Float? rpob449_frequency # default 0.1
Float? etha237_frequency # default 0.1
File? expert_rule_regions_bed


Int cpu = 1
Int disk_size = 100
String docker = "us-docker.pkg.dev/general-theiagen/theiagen/tbp-parser:2.0.0"
Int disk_size = 100
Int memory = 4
Int cpu = 1
}
command <<<
# get version
Expand Down
4 changes: 2 additions & 2 deletions tasks/species_typing/mycobacterium/task_tbprofiler.wdl
Original file line number Diff line number Diff line change
Expand Up @@ -20,9 +20,9 @@ task tbprofiler {
Boolean tbprofiler_run_cdph_db = false
Boolean tbprofiler_run_custom_db = false

Int cpu = 8
String docker = "us-docker.pkg.dev/general-theiagen/staphb/tbprofiler:6.4.0"
Int cpu = 8
Int disk_size = 100
String docker = "us-docker.pkg.dev/general-theiagen/staphb/tbprofiler:6.4.0"
Int memory = 16
}
command <<<
Expand Down

0 comments on commit bc9dc69

Please sign in to comment.