[Documentation] Update MIDAS database documentation in TheiaProk #667
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
🗑️ This dev branch should be deleted after merging to main.
🧠 Summary
This PR updates the TheiaProk documentation to specify the use of the MIDAS v1.2 reference database as the default for bacterial species detection in metagenomic data. Minor adjustments for clarity were also made and indicate the user can also upload a custom database with link to midas github page to create new custom db
🔬 Final Developer Checklist
🎯 Reviewer Checklist