Skip to content

theiagen/tbp-parser

Repository files navigation

tbp-parser

NOT FOR DIAGNOSTIC USE

CAUTION: The information produced by this program should not be used for clinical reporting unless and until extensive validation has occured in your laboratory on a stable version. Otherwise, the outputs of tbp-parser are for research use only.

Overview

This repository contains the tbp-parser tool which parses the JSON output of Jody Phelan's TBProfiler tool. Available as a downloadable Python package and as a Docker image, tbp-parser converts the output of TBProfiler into four files.

Please reach out to us at [email protected] if you would like any custom file formats and/or changes to these output files that suit your individual needs.

See our full documentation here.