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  1. filter_contigs filter_contigs Public

    Simple BioPython toy to filter contigs based on size. Used highly-Pythonic "generator" design - ideal for adaptation to stream processing.

    Python 8 3

  2. sra_exp sra_exp Public

    Short script to lookup SRA Experiment accessions from SRA Run accessions

    Shell 1

  3. dl-biodb dl-biodb Public

    Repo for work surrounding downloadable biological databases

    1

  4. log_verbosity log_verbosity Public

    Recipe for controlling log level via argparse and Python

    Python 1

  5. header_renamer header_renamer Public

    Rename FASTQ headers into a fake Illumina format.

    Python

  6. spades_stats spades_stats Public

    Forked from karinlag/spades_stats

    Python

Repositories

Showing 6 of 6 repositories
  • log_verbosity Public

    Recipe for controlling log level via argparse and Python

    tinybio/log_verbosity’s past year of commit activity
    Python 1 0 0 0 Updated Oct 17, 2019
  • dl-biodb Public

    Repo for work surrounding downloadable biological databases

    tinybio/dl-biodb’s past year of commit activity
    1 0 1 0 Updated Aug 29, 2017
  • filter_contigs Public

    Simple BioPython toy to filter contigs based on size. Used highly-Pythonic "generator" design - ideal for adaptation to stream processing.

    tinybio/filter_contigs’s past year of commit activity
    Python 8 3 0 0 Updated Aug 3, 2017
  • header_renamer Public

    Rename FASTQ headers into a fake Illumina format.

    tinybio/header_renamer’s past year of commit activity
    Python 0 0 0 0 Updated Apr 13, 2017
  • spades_stats Public Forked from karinlag/spades_stats
    tinybio/spades_stats’s past year of commit activity
    Python 0 1 0 0 Updated Jan 20, 2017
  • sra_exp Public

    Short script to lookup SRA Experiment accessions from SRA Run accessions

    tinybio/sra_exp’s past year of commit activity
    Shell 1 0 0 0 Updated Oct 25, 2016

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