AusTraits v1.0.0
This is major release of the AusTraits database.
- austraits-1.0.0.zip: contains the compiled dataset
- source code (v1.0.0.zip): contains the source materials used to build the compiled dataset
For details on access, structure and usage please visit https://doi.org/10.5281/zenodo.3568417
This release was generated from source materials available at
https://github.com/traitecoevo/austraits.build/releases/tag/v1.0.0
A full set of changes in the source can be viewed at:
v0.9.1...v1.0.0
Compared to the last version, this release contains substantial additions of new data and improvement of old data, mainly by Lizzy Wenk.
| version | dataset_id | species | sites | traits | records |
|---|---|---|---|---|---|
| v0.9.1 | 175 | 21892 | 3436 | 170 | 467523 |
| v1.0.0 | 243 | 23383 | 4196 | 345 | 656467 |
This release contains:
-
98 new sources added to the dataset: Angevin_2011, Baker_2019,
Bloomfield_2018, Buckton_2019, Cernusak_2006, Cernusak_2011,
Cooper_2013, CPBR_2002, Cross_2009, Crous_2013, Crous_2019,
Curtis_2012, Dong_2017, Duan_2015, Dwyer_2018,
EsperonRodriguez_2019, EsperonRodriguez_2019_2, Falster_2003,
Firn_2019, French_2017, Gallagher_2012, Gallagher_2015,
Gallagher_2018, Geange_2017, Ghannoum_2010, Gray_2019,
Gross_2005, Hall_1981, Hocking_1982, Hocking_1986, Huang_2015,
Jin_2019, Jordan_2001, Jurado_1992, Kotowska_2020, Kuo_1982,
Leigh_2003, Leigh_2006, Leishman_2007, Lewis_2015, Meers_2010,
Metcalfe_2009, Metcalfe_2020_1, Metcalfe_2020_2, Milberg_1997,
Milberg_1998, Mokany_2015, Moore_2019_2, Muir_2014,
Nicholson_2017, Onoda_2010, Ooi_2007, Ooi_2018, Pickering_2014,
Pickup_2002, Pickup_2005, Pollock_2012, Pollock_2018,
Prior_2016, RBGSYD_2014_2, Read_2005, Reynolds_2018,
Richards_2008, Roderick_1999, Roderick_2002, Rosell_2014,
Sams_2017, Schmidt_1993, Schmidt_1997, Schmidt_2010,
Schulze_2006, Schulze_2006_2, Schulze_2014, Smith_1996,
Smith_2012, Soper_2014, Staples_2019, Stewart_1995,
Taseski_2017, Taylor_2008, Thomas_2017, Tomlinson_2019,
Turner_2010, Veneklaas_2003, Venn_2011, Vesk_2019,
Vlasveld_2018, Warren_2005, Warren_2006, Weerasinghe_2014,
Westman_1977, Williams_2005, Williams_2020_1, Wright_2009,
Wright_2019, Zanne_2009, Zieminska_2013, Zieminska_2015 -
30 sources removed– most replaced by corrected or updated
sources above: Angevin_2010, BFD_1974, Bolza_1975, CAB_2009,
Chave_2009, Chinh_1999, Chudnoff_1984, CIRAD_2009,
Cornellison_0000, CPRR_2002, Cross_2011, Desh_1996,
Dimitri_1973, Dwyer_2017_2, EsperonRodriguez_0000,
EsperonRodriguez_0000_2, Flynn_2001, Goldsmith_1981, Hong_1999,
ICRAF_2009, Jin_0000, Martawijaya_1992, Meier_2007, Ooi_0000,
Prospect_2009, RBGSYD_0000, Seng_1951, Wells_2009,
Westoby_2016, Wright_2004 -
258809 new or updated records for 96 existing traits
-
53285 new records for 152 new traits: bark_C_per_dry_mass,
bark_Ca_per_dry_mass, bark_delta13C, bark_delta15N,
bark_density, bark_K_per_dry_mass, bark_Mg_per_dry_mass,
bark_N_per_dry_mass, bark_Na_per_dry_mass,
bark_P_per_dry_mass, ca, carotenoid_per_area,
carotenoid_per_dry_mass, cell_rubisco_concentration,
cell_rubisco_N_per_total_N, cell_thylakoid_N_per_total_N,
chlorophyll_A_B_ratio, chlorophyll_A_per_area,
chlorophyll_A_per_dry_mass, chlorophyll_B_per_area,
chlorophyll_B_per_dry_mass, chlorophyll_per_area,
chlorophyll_per_dry_mass, ci, ci_at_Amax, ci_at_Asat,
ci_over_ca, dead_wood_Ca_per_dry_mass,
dead_wood_K_per_dry_mass, dead_wood_Mg_per_dry_mass,
dead_wood_N_per_dry_mass, dead_wood_Na_per_dry_mass,
dead_wood_P_per_dry_mass, dispersers,
epidermal_cell_density_abaxial,
epidermal_cell_density_adaxial,
epidermal_cell_density_both_sides, epidermis_thickness,
epidermis_thickness_lower_leaf_surface,
epidermis_thickness_upper_leaf_surface, fire_cued_seeding,
flower_count_maximum, flower_N_per_dry_mass, fruit_breadth,
fruit_Ca_per_dry_mass, fruit_K_per_dry_mass, fruit_mass,
fruit_Mg_per_dry_mass, fruit_N_per_dry_mass,
fruit_P_per_dry_mass, fruit_S_per_dry_mass,
fruit_type_botanical, fruit_wall_width, germination,
insoluable_protein_per_area, Jmax_per_area, leaf_absorption,
leaf_Cl_per_dry_mass, leaf_dark_transpiration_per_area,
leaf_delta18O, leaf_density, leaf_mass_to_stem_mass,
leaf_PRI, leaf_reflectance, leaf_reflectance_near_infrared,
leaf_soluable_starch_per_mass,
leaf_soluable_sugars_per_mass,
leaf_total_non-structural_carbohydrates_per_area,
leaf_total_non-structural_carbohydrates_per_mass,
leaf_transmission, leaf_transpiration_at_Asat,
leaf_water_content_per_dry_mass,
leaf_water_content_per_fresh_mass,
leaf_water_content_per_saturated_mass, leaf_xylem_delta15N,
modulus_of_elasticity_bark, modulus_of_elasticity_stem,
modulus_of_elasticity_xylem, palisade_cell_length,
palisade_cell_width, palisade_layer_number, pendulous_leaves,
photosynthetic_bark, physical_defence, pollination_syndrome,
pollination_system, propagule_longevity,
resprouting_proportion_individuals, resprouting_strength,
root_C_per_dry_mass, root_delta13C, root_delta15N,
root_dry_matter_content, root_mass_fraction,
root_N_per_dry_mass, root_shoot_ratio,
root_soluable_starch_per_mass,
root_soluable_sugars_per_mass, root_xylem_delta15N,
seed_Ca_concentration, seed_K_concentration,
seed_Mg_concentration, seed_N_concentration,
seed_S_concentration, sex_type, soil_seedbank,
soluable_protein_per_area, soluable_starch_per_area,
soluable_sugars_per_area, specific_taproot_length, spinescence,
sprout_depth, starch_per_area, stem_count_categorical,
stem_hydraulic_conductivity, stem_mass_fraction,
stem_respiration_per_dry_mass,
stem_soluable_starch_per_mass,
stem_soluable_sugars_per_mass,
stem_water_content_per_saturated_mass, stem_water_delta18O,
stomatal_conductance_per_area_ambient,
stomatal_conductance_per_area_at_Asat,
stomatal_density_abaxial, stomatal_density_adaxial,
support_fraction, Vcmax_per_area, vegetative_regeneration,
vein_angle_secondary, vein_density, vessel_density,
vessel_diameter, vessel_diameter_hydraulic,
vessel_lumen_fraction, vessel_wall_fraction,
vine_climbing_mechanism, water_use_efficiency_intrinsic,
water_use_efficiency_photosynthetic,
wood_axial_parenchyma_fraction, wood_C_per_dry_mass,
wood_Ca_per_dry_mass, wood_conduit_fraction, wood_delta13C,
wood_delta15N, wood_fibre_fraction, wood_K_per_dry_mass,
wood_Mg_per_dry_mass, wood_N_per_dry_mass,
wood_Na_per_dry_mass, wood_P_per_dry_mass,
wood_ray_fraction, wood_tracheid_fraction -
rlength(new_people)new contributors: Aaron Phillips, Adrienne
Nicotra, Aine Nicholson, Alessandro Conti, Allison Frith, Andrea
Leigh, Andrew Baker, Anna Salomaa, Anne Fuchs, Annette Muir, Ben
French, Benjamin Smith, Bree-Anne Laugier-Kitchener, Bronwyn
Collins, Brook Clinton, Carolyn Vlasveld, Catherine Pickering,
Charles Warren, Chris Fahey, Chris Guinane, Christiane Ludwig,
Claire Laws, Colin P. Osborne, Collin W. Ahrens, Dana Lanceman,
Daniel Metacalfe, Daniel Montoya Londono, Daniel Taylor, David
Tissue, Dean Nicolle, Des Nelson, Dominic Neyland, Elissa McFarlane,
Ellen Curtis, Emma Gray, Erica Williams, Fiona Soper, Frank van
Langevelde, Freya Thomas, Genevieve Buckton, George Perry, George
Stewart, Guomin Huang, Guy Taseski, Hannah MacPherson, Hoa Ran Lai,
Honglang Duan, Iain Colin Prentice, Ian Kealley, J. Bastow Wilson,
Jacob McOverton, James Camac, James Lewis, Jennifer Read, Jian Yen,
John Foster, John Kuo, Juergen Kellermann, Jugi Ilic, Julieta A.
Rosell, Kaely Kreger, Karen Marais, Kasia Zieminska, Kathryn Willis,
Keith Bloomfield, Kristine Crous, Lasantha Weerasinghe, Liz Lindsay,
Loren Pollitt, Lucas Cernusak, Luka Kovac, Luke Shoo, Malcolm
Trudgeon, Margaret Mayfield, Mark G. Tjoelker, Marlien van der
Merwe, Martin Lambert, Martyna Kotowska, Mary Maconochie, Matthew
Alfonzetti, Matthew Tom Harrison, Maurizio Rossetto, Melinda Pickup,
Meredith Cosgrove, Michael Roderick, Michael Sams, Michelle
Cochrane, Neil C. Turner, Neil Turner, Nicholas Moore, Nick
Williams, Ning Dong, Oula Ghannoum, Owen Atkin, Paul Rymer, Per
Milberg, Peter Hocking, Pieter Poot, R.J.Williams, Renee Smith, Riah
Mason, Richard Mazanec, Rob Polmear, Robert Lanfear, Ronald
Gardiner, Sonya Geange, Sophia Amini, Susanna Venn, Suzanne Schmidt,
Tammy Haslehurst, Tanja Lenz, Tara Boreham, Thomas Pyne, TJ Hall,
Tom North, Tony French, Trevor Meers, Ule Niinemets, Victoria
Reynolds, W.E Westman, Willi A. Brand, William Cornwell, William
Morris, Yusuke Onoda
Details on new studies:
| dataset_id | species | locations | traits | records |
|---|---|---|---|---|
| Angevin_2011 | 97 | 1 | 7 | 529 |
| Baker_2019 | 57 | 39 | 3 | 114 |
| Bloomfield_2018 | 79 | 7 | 24 | 26932 |
| Buckton_2019 | 23 | 1 | 26 | 2203 |
| Cernusak_2006 | 4 | 1 | 10 | 303 |
| Cernusak_2011 | 8 | 6 | 21 | 1644 |
| Cooper_2013 | 2703 | 1 | 11 | 26983 |
| CPBR_2002 | 886 | 1 | 7 | 6889 |
| Cross_2009 | 50 | 1 | 4 | 194 |
| Crous_2013 | 1 | 1 | 8 | 391 |
| Crous_2019 | 1 | 1 | 13 | 2366 |
| Curtis_2012 | 95 | 4 | 14 | 1326 |
| Dong_2017 | 242 | 27 | 10 | 3909 |
| Duan_2015 | 1 | 1 | 13 | 2120 |
| Dwyer_2018 | 17 | 1 | 2 | 193 |
| EsperonRodriguez_2019 | 4 | 4 | 10 | 796 |
| EsperonRodriguez_2019_2 | 2 | 1 | 7 | 140 |
| Falster_2003 | 38 | 2 | 3 | 114 |
| Firn_2019 | 45 | 4 | 6 | 2049 |
| French_2017 | 12 | 1 | 3 | 36 |
| Gallagher_2012 | 94 | 1 | 7 | 302 |
| Gallagher_2015 | 802 | 1 | 1 | 927 |
| Gallagher_2018 | 62 | 4 | 5 | 1899 |
| Geange_2017 | 3 | 1 | 19 | 4872 |
| Ghannoum_2010 | 2 | 1 | 20 | 2364 |
| Gray_2019 | 18 | 4 | 12 | 818 |
| Gross_2005 | 1121 | 1 | 2 | 2279 |
| Hall_1981 | 20 | 1 | 2 | 178 |
| Hocking_1982 | 2 | 1 | 14 | 28 |
| Hocking_1986 | 9 | 9 | 27 | 189 |
| Huang_2015 | 1 | 1 | 18 | 870 |
| Jin_2019 | 1 | 184 | 1 | 184 |
| Jordan_2001 | 1299 | 1 | 7 | 8208 |
| Jurado_1992 | 105 | 1 | 1 | 315 |
| Kotowska_2020 | 16 | 67 | 22 | 2992 |
| Kuo_1982 | 8 | 8 | 21 | 168 |
| Leigh_2003 | 1 | 1 | 5 | 108 |
| Leigh_2006 | 1 | 1 | 12 | 358 |
| Leishman_2007 | 88 | 7 | 8 | 905 |
| Lewis_2015 | 1 | 1 | 29 | 1902 |
| Meers_2010 | 127 | 1 | 11 | 1378 |
| Metcalfe_2009 | 285 | 8 | 17 | 4518 |
| Metcalfe_2020_1 | 308 | 1 | 20 | 1643 |
| Metcalfe_2020_2 | 603 | 1 | 19 | 9277 |
| Milberg_1997 | 4 | 2 | 6 | 24 |
| Milberg_1998 | 21 | 1 | 4 | 81 |
| Mokany_2015 | 1180 | 1 | 3 | 2387 |
| Moore_2019_2 | 52 | 1 | 12 | 2080 |
| Muir_2014 | 9 | 5 | 3 | 25 |
| Nicholson_2017 | 30 | 1 | 2 | 115 |
| Onoda_2010 | 32 | 4 | 7 | 1085 |
| Ooi_2007 | 181 | 98 | 2 | 14742 |
| Ooi_2018 | 5 | 1 | 1 | 25 |
| Pickering_2014 | 169 | 51 | 4 | 691 |
| Pickup_2002 | 20 | 1 | 2 | 322 |
| Pickup_2005 | 70 | 4 | 5 | 389 |
| Pollock_2012 | 20 | 135 | 10 | 3996 |
| Pollock_2018 | 17 | 18 | 6 | 910 |
| Prior_2016 | 7 | 1 | 3 | 21 |
| RBGSYD_2014_2 | 6421 | 1 | 14 | 81488 |
| Read_2005 | 40 | 3 | 8 | 1562 |
| Reynolds_2018 | 4 | 1 | 10 | 551 |
| Richards_2008 | 74 | 39 | 51 | 891 |
| Roderick_1999 | 57 | 28 | 7 | 453 |
| Roderick_2002 | 4 | 1 | 4 | 500 |
| Rosell_2014 | 62 | 4 | 8 | 496 |
| Sams_2017 | 234 | 8 | 6 | 1042 |
| Schmidt_1993 | 402 | 1 | 3 | 522 |
| Schmidt_1997 | 46 | 1 | 11 | 388 |
| Schmidt_2010 | 19 | 2 | 20 | 2258 |
| Schulze_2006 | 406 | 1 | 3 | 1263 |
| Schulze_2006_2 | 72 | 74 | 7 | 2483 |
| Schulze_2014 | 248 | 66 | 13 | 2494 |
| Smith_1996 | 87 | 5 | 17 | 11342 |
| Smith_2012 | 1 | 1 | 27 | 1014 |
| Soper_2014 | 34 | 5 | 11 | 1044 |
| Staples_2019 | 166 | 1 | 4 | 9686 |
| Stewart_1995 | 114 | 4 | 6 | 863 |
| Taseski_2017 | 22 | 1 | 5 | 110 |
| Taylor_2008 | 7 | 4 | 11 | 390 |
| Thomas_2017 | 18 | 5 | 7 | 126 |
| Tomlinson_2019 | 12 | 11 | 11 | 3888 |
| Turner_2010 | 17 | 4 | 7 | 671 |
| Veneklaas_2003 | 29 | 1 | 18 | 565 |
| Venn_2011 | 40 | 1 | 3 | 120 |
| Vesk_2019 | 46 | 1 | 3 | 4439 |
| Vlasveld_2018 | 319 | 1 | 5 | 2613 |
| Warren_2005 | 1 | 1 | 16 | 240 |
| Warren_2006 | 29 | 2 | 13 | 906 |
| Weerasinghe_2014 | 26 | 63 | 17 | 1552 |
| Westman_1977 | 16 | 1 | 30 | 559 |
| Williams_2005 | 182 | 1 | 6 | 1063 |
| Williams_2020_1 | 943 | 1 | 12 | 9005 |
| Wright_2009 | 41 | 8 | 13 | 1272 |
| Wright_2019 | 18 | 1 | 37 | 7836 |
| Zanne_2009 | 326 | 1 | 1 | 409 |
| Zieminska_2013 | 23 | 4 | 10 | 720 |
| Zieminska_2015 | 67 | 3 | 12 | 2464 |