Draft: Implement the multi-ion MHD system of Toth #11128
Workflow file for this run
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths-ignore: | |
| - 'AUTHORS.md' | |
| - 'CITATION.bib' | |
| - 'CONTRIBUTING.md' | |
| - 'LICENSE.md' | |
| - 'NEWS.md' | |
| - 'README.md' | |
| - '.zenodo.json' | |
| - '.github/workflows/benchmark.yml' | |
| - '.github/workflows/CompatHelper.yml' | |
| - '.github/workflows/TagBot.yml' | |
| - 'benchmark/**' | |
| - 'docs/**' | |
| - 'utils/**' | |
| pull_request: | |
| paths-ignore: | |
| - 'AUTHORS.md' | |
| - 'CITATION.bib' | |
| - 'CONTRIBUTING.md' | |
| - 'LICENSE.md' | |
| - 'NEWS.md' | |
| - 'README.md' | |
| - '.zenodo.json' | |
| - '.github/workflows/benchmark.yml' | |
| - '.github/workflows/CompatHelper.yml' | |
| - '.github/workflows/TagBot.yml' | |
| - 'benchmark/**' | |
| - 'docs/**' | |
| - 'utils/**' | |
| workflow_dispatch: | |
| # Cancel redundant CI tests automatically | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| if: "!contains(github.event.head_commit.message, 'skip ci')" | |
| # We could also include the Julia version as in | |
| # name: ${{ matrix.trixi_test }} - ${{ matrix.os }} - Julia ${{ matrix.version }} - ${{ matrix.arch }} | |
| # to be more specific. However, that requires us updating the required CI tests whenever we update Julia. | |
| name: ${{ matrix.trixi_test }} - ${{ matrix.os }} - ${{ matrix.arch }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| version: | |
| - '1.10' | |
| # - '~1.10.0-0' # including development versions | |
| # - 'nightly' | |
| os: | |
| - ubuntu-latest | |
| arch: | |
| - x64 | |
| trixi_test: | |
| - tree_part1 | |
| - tree_part2 | |
| - tree_part3 | |
| - tree_part4 | |
| - tree_part5 | |
| - tree_part6 | |
| - structured | |
| - p4est_part1 | |
| - p4est_part2 | |
| - t8code_part1 | |
| - t8code_part2 | |
| - unstructured_dgmulti | |
| - parabolic | |
| - paper_self_gravitating_gas_dynamics | |
| - misc_part1 | |
| - misc_part2 | |
| - performance_specializations_part1 | |
| - performance_specializations_part2 | |
| - mpi | |
| - threaded | |
| include: | |
| - version: '1.8' | |
| os: ubuntu-latest | |
| arch: x64 | |
| trixi_test: threaded_legacy | |
| - version: '1.9' | |
| os: ubuntu-latest | |
| arch: x64 | |
| trixi_test: threaded_legacy | |
| - version: '1.10' | |
| os: macos-13 | |
| arch: x64 | |
| trixi_test: mpi | |
| - version: '1.10' | |
| os: macos-latest | |
| arch: aarch64 | |
| trixi_test: threaded | |
| - version: '1.10' | |
| os: windows-latest | |
| arch: x64 | |
| trixi_test: mpi | |
| - version: '1.10' | |
| os: windows-latest | |
| arch: x64 | |
| trixi_test: threaded | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: julia-actions/setup-julia@v2 | |
| with: | |
| version: ${{ matrix.version }} | |
| arch: ${{ matrix.arch }} | |
| - run: julia -e 'using InteractiveUtils; versioninfo(verbose=true)' | |
| - uses: julia-actions/cache@v2 | |
| - uses: julia-actions/julia-buildpkg@v1 | |
| env: | |
| PYTHON: '' | |
| - name: Run tests without coverage | |
| uses: julia-actions/julia-runtest@v1 | |
| with: | |
| coverage: false | |
| env: | |
| PYTHON: '' | |
| TRIXI_TEST: ${{ matrix.trixi_test }} | |
| - name: Run tests with coverage | |
| uses: julia-actions/julia-runtest@v1 | |
| with: | |
| coverage: true | |
| env: | |
| PYTHON: '' | |
| TRIXI_TEST: ${{ matrix.trixi_test }} | |
| - uses: julia-actions/julia-processcoverage@v1 | |
| with: | |
| directories: src,examples,ext | |
| - uses: codecov/codecov-action@v5 | |
| with: | |
| files: ./lcov.info | |
| flags: unittests | |
| name: codecov-umbrella | |
| fail_ci_if_error: true | |
| verbose: true | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| # The standard setup of Coveralls is just annoying for parallel builds, see, e.g., | |
| # https://github.com/trixi-framework/Trixi.jl/issues/691 | |
| # https://github.com/coverallsapp/github-action/issues/47 | |
| # https://github.com/coverallsapp/github-action/issues/67 | |
| # This standard setup is reproduced below for completeness. | |
| # - uses: coverallsapp/github-action@master | |
| # with: | |
| # github-token: ${{ secrets.GITHUB_TOKEN }} | |
| # flag-name: run-${{ matrix.trixi_test }}-${{ matrix.os }}-${{ matrix.version }}-${{ matrix.arch }}-${{ github.run_id }} | |
| # parallel: true | |
| # path-to-lcov: ./lcov.info | |
| # Instead, we use a more tedious approach: | |
| # - Store all individual coverage files as artifacts (directly below) | |
| # - Download and merge individual coverage reports in another step | |
| # - Upload only the merged coverage report to Coveralls | |
| - shell: bash | |
| run: | | |
| cp ./lcov.info ./lcov-${{ matrix.trixi_test }}-${{ matrix.os }}-${{ matrix.version }}-${{ matrix.arch }}.info | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: lcov-${{ matrix.trixi_test }}-${{ matrix.os }}-${{ matrix.version }}-${{ matrix.arch }} | |
| path: ./lcov-${{ matrix.trixi_test }}-${{ matrix.os }}-${{ matrix.version }}-${{ matrix.arch }}.info | |
| finish: | |
| needs: test | |
| runs-on: ubuntu-latest | |
| steps: | |
| # The standard setup of Coveralls is just annoying for parallel builds, see, e.g., | |
| # https://github.com/trixi-framework/Trixi.jl/issues/691 | |
| # https://github.com/coverallsapp/github-action/issues/47 | |
| # https://github.com/coverallsapp/github-action/issues/67 | |
| # This standard setup is reproduced below for completeness. | |
| # - name: Coveralls Finished | |
| # uses: coverallsapp/github-action@master | |
| # with: | |
| # github-token: ${{ secrets.GITHUB_TOKEN }} | |
| # parallel-finished: true | |
| # Instead, we use the more tedious approach described above. | |
| # At first, we check out the repository and download all artifacts | |
| # (and list files for debugging). | |
| - uses: actions/checkout@v4 | |
| - uses: actions/download-artifact@v4 | |
| - run: ls -R | |
| # Next, we merge the individual coverage files and upload | |
| # the combined results to Coveralls. | |
| - name: Merge lcov files using Coverage.jl | |
| shell: julia --color=yes {0} | |
| run: | | |
| using Pkg | |
| Pkg.activate(temp=true) | |
| Pkg.add("Coverage") | |
| using Coverage | |
| coverage = LCOV.readfolder(".") | |
| for cov in coverage | |
| cov.filename = replace(cov.filename, "\\" => "/") | |
| end | |
| coverage = merge_coverage_counts(coverage) | |
| @show covered_lines, total_lines = get_summary(coverage) | |
| LCOV.writefile("./lcov.info", coverage) | |
| - uses: coverallsapp/github-action@v2 | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| path-to-lcov: ./lcov.info | |
| # Upload merged coverage data as artifact for debugging | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: lcov | |
| path: ./lcov.info | |
| # That's it | |
| - run: echo "Finished testing Trixi" |