Code

Perk p2 single ext#1908

Code

Merged

ranocha merged 170 commits intotrixi-framework:maintrixi-framework/Trixi.jl:mainfrom warisa-r:PERK_p2_Single_extwarisa-r/Trixi.jl:PERK_p2_Single_extCopy head branch name to clipboardMay 23, 2024

+760-4

Commits

Commits on Jan 29, 2024

• Templates for PERK p2, p3

  DanielDoehring

  committed
  befd590

• example

  DanielDoehring

  committed
  0b378f7

Commits on Feb 2, 2024

• constructor changed

  warisa-r

  committed
  42c74d1

• Modified so that both of the constructor stay

  warisa-r

  committed
  04784df

• Merge pull request #20 from warisa-r/PERK_p2p3_Single

  Show description for 3fcad2a
  DanielDoehring

  authored
  3fcad2a

Commits on Feb 8, 2024

• bring back eps

  DanielDoehring

  committed
  55f4165

• correct val

  DanielDoehring

  committed
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Commits on Feb 14, 2024

• add constructor of PERK3

  warisa-r

  committed
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• minor fixes

  warisa-r

  committed
  e518386

Commits on Feb 15, 2024

• function and variable name adjustments

  warisa-r

  committed
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• spelling fix

  warisa-r

  committed
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Commits on Feb 16, 2024

• Merge branch 'PERK_p2p3_Single' into PERK_p2p3_Single

  DanielDoehring

  authored
  de86860

Commits on Feb 18, 2024

• Merge pull request DanielDoehring#21 from warisa-r/PERK_p2p3_Single

  Show description for 6436708
  DanielDoehring

  authored
  6436708

Commits on Mar 3, 2024

• Change names and spacing according to style guide

  warisa-r

  committed
  03f0af1

• Merge branch 'PERK_p2p3_Single' of github.com:warisa-r/Trixi.jl into PERK_p2p3_Single

  warisa-r

  committed
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• spelling correction

  warisa-r

  committed
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Commits on Mar 4, 2024

• Apply suggestions from code review

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  warisa-r

  and

  DanielDoehring

  authored
  08b70d6

Commits on Mar 5, 2024

• Merge pull request DanielDoehring#24 from warisa-r/PERK_p2p3_Single

  Show description for 9881351
  DanielDoehring

  authored
  9881351

• snake case

  DanielDoehring

  committed
  bdb2db5

• Merge branch 'PERK_p2p3_Single' of github.com:DanielDoehring/Trixi.jl into PERK_p2p3_Single

  DanielDoehring

  committed
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• revisit perk single p2 p3

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• fmt

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• fmt

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• Merge branch 'main' into PERK_p2p3_Single

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• semantic ordering

  DanielDoehring

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Commits on Mar 6, 2024

• add literature

  DanielDoehring

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  fbcd6e3

• Strip code of p = 3

  warisa-r

  committed
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Commits on Mar 7, 2024

• Add the line to show the error of the elixir

  warisa-r

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Commits on Mar 8, 2024

• Make adjustments to a test file and delete example of PERK3

  warisa-r

  committed
  5f763bb

• Update Project.toml

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  warisa-r

  and

  DanielDoehring

  authored
  9149b7b

• Update examples/tree_1d_dgsem/elixir_advection_PERK2.jl

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  warisa-r

  and

  DanielDoehring

  authored
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• Add comments in an example of PERK2

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  warisa-r

  and

  DanielDoehring

  authored
  0bafb7f

• Update src/Trixi.jl

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  warisa-r

  and

  DanielDoehring

  authored
  64926fb

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  DanielDoehring

  authored
  6ce99e6

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  DanielDoehring

  authored
  50cf650

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  DanielDoehring

  authored
  f48cf85

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  DanielDoehring

  authored
  e7060e5

• add tspan as a parameter and adjust the elixir accordingly

  warisa-r

  committed
  88e8168

• add an additional constructor and modify the function compute_PERK2_butcher_tableau

  warisa-r

  committed
  bb938d9

Commits on Mar 11, 2024

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

  Show description for 38f4fcb
  

  warisa-r

  and

  DanielDoehring

  authored
  38f4fcb

Commits on Mar 12, 2024

• update filter function in polynomial optimizer, add literature, and change se_factors to bc_factors

  warisa-r

  committed
  7619b2a

• Merge branch 'PERK_p2_Single' of github.com:warisa-r/Trixi.jl into PERK_p2_Single

  warisa-r

  committed
  98bfe13

• Apply suggestions from code review

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  warisa-r

  and

  DanielDoehring

  authored
  f2d9fa8

• change tspan to have (,) instead of[,]. filter_eigenvalues minor adjustments

  warisa-r

  committed
  ccf4260

Commits on Mar 14, 2024

• Merge branch 'main' into PERK_p2_Single

  DanielDoehring

  authored
  11e487c

• Apply suggestions from code review

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  warisa-r

  and

  DanielDoehring

  authored
  6cb0572

• Update src/time_integration/paired_explicit_runge_kutta/polynomial_optimizer.jl

  Show description for 1f4e9d0
  

  DanielDoehring

  and

  ranocha

  authored
  1f4e9d0

Commits on Mar 15, 2024

• Apply suggestions from code review

  DanielDoehring

  authored
  61da622

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

  DanielDoehring

  authored
  16ac4d5

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

  DanielDoehring

  authored
  b3c12ee

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

  DanielDoehring

  authored
  cb0ef29

• Apply suggestions from code review

  DanielDoehring

  authored
  a1506a0

• use readdlm instead of read_file

  warisa-r

  committed
  6fc11d5

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

  DanielDoehring

  authored
  ef1f508

• add DelimFIles

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• fmt

  DanielDoehring

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• Unit tests

  DanielDoehring

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• Merge branch 'main' into PERK_p2_Single

  DanielDoehring

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• compat

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• ecos compat

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  e17f7ad

• compat

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• compat

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• compat

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• compat

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• Merge branch 'main' into PERK_p2_Single

  DanielDoehring

  authored
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• callbacks

  DanielDoehring

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  3280fc1

Commits on Mar 17, 2024

• increase allowed allocs

  DanielDoehring

  committed
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Commits on Mar 18, 2024

• fmt

  DanielDoehring

  committed
  a1da64e

• timer for step callbacks

  DanielDoehring

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• deps compat

  DanielDoehring

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  214fa6a

• remove del files compat

  DanielDoehring

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  443a162

• skip delimitedfiles in downgrade compat

  DanielDoehring

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  247946b

• v1

  DanielDoehring

  committed
  1b3d4f6

Commits on Mar 20, 2024

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

  DanielDoehring

  authored
  1b94f83

Commits on Mar 25, 2024

• Merge branch 'main' into PERK_p2_Single

  DanielDoehring

  authored
  2ecb50f

Commits on Apr 12, 2024

• modular imp of the integrator

  warisa-r

  committed
  0d410e4

Commits on Apr 15, 2024

• modularized PolynamialOptimizer

  warisa-r

  committed
  9c55c75

• PolynomialOpt modularized

  warisa-r

  committed
  9a5d8f6

• use "fake" extension

  warisa-r

  committed
  8dd65bf

Commits on Apr 16, 2024

• make ECOS weakdep

  warisa-r

  committed
  99c1f93

• fix name

  warisa-r

  committed
  f6332fb

• comment + fmt

  warisa-r

  committed
  c5fa58b

Commits on Apr 18, 2024

• Merge branch 'main' into PERK_p2_Single_ext

  DanielDoehring

  authored
  f7264c7

Commits on Apr 19, 2024

• Apply suggestions from code review

  Show description for 8317412
  

  warisa-r

  and

  DanielDoehring

  authored
  8317412

Commits on Apr 22, 2024

• comment, fix, and make threshold optional

  warisa-r

  committed
  a4036d5

Commits on Apr 23, 2024

• Apply suggestions from code review

  Show description for 9d9a31b
  

  warisa-r

  and

  DanielDoehring

  authored
  9d9a31b

• edit tspan and alive_interval

  warisa-r

  committed
  2e60b69

• Merge branch 'main' into PERK_p2_Single_ext

  DanielDoehring

  authored
  1af9900

Commits on Apr 24, 2024

• Apply suggestions from code review

  Show description for 98bb965
  

  warisa-r

  and

  DanielDoehring

  authored
  98bb965

• fmt

  warisa-r

  committed
  e76eaec

• fix fmr in test unit

  warisa-r

  committed
  8bec402

• fix fmt in test_unit.jl

  warisa-r

  committed
  3330450

• Merge branch 'PERK_p2_Single_ext' of github.com:warisa-r/Trixi.jl into PERK_p2_Single_ext

  warisa-r

  committed
  247301d

Commits on Apr 29, 2024

• some fixes according to code review

  warisa-r

  committed
  deb02a1

• add ECOS as a part of enabling TrixiConvexECOSExt.jl compiles

  warisa-r

  committed
  9aea224

• state functions and classes from Convex package used in polynomial optimization

  warisa-r

  committed
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• fmt

  warisa-r

  committed
  30beab8

• remove unconditional output in bisection

  warisa-r

  committed
  9c9540c

• Apply suggestions from code review

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  warisa-r

  and

  sloede

  authored
  f740c38

• apply suggestion from code review

  warisa-r

  committed
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• minor fix

  warisa-r

  committed
  4a6bf89

• Apply suggestions from code review

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  warisa-r

  and

  sloede

  authored
  6a78615

• add verbose as an optional argument for printing out some outputs during bisection and filtering eigenvalues

  warisa-r

  committed
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• remove the file with upper case

  warisa-r

  committed
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• add the file with corrected name

  warisa-r

  committed
  dc03ed2

Commits on Apr 30, 2024

• Merge branch 'main' into PERK_p2_Single_ext

  warisa-r

  authored
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• minor fix

  warisa-r

  committed
  402211c

• Merge branch 'PERK_p2_Single_ext' of github.com:warisa-r/Trixi.jl into PERK_p2_Single_ext

  warisa-r

  committed
  fd336dd

• move constructors outside of struct

  warisa-r

  committed
  47ce648

• Apply suggestions from code review

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  warisa-r

  and

  sloede

  authored
  e15896a

• alter some names from being abbreviated and some fixes

  warisa-r

  committed
  f46995e

• add comments for some functions and move all polynomial optimizaton related functions to TrixiConvexECOSExt.jl

  warisa-r

  committed
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• add comments to functions computing butcher tableau

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• fmt

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• apply suggestions + fmt

  warisa-r

  committed
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• apply suggestion according to code review

  warisa-r

  committed
  1bfbf8c

Commits on May 2, 2024

• Apply suggestions from code review

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  warisa-r

  and

  DanielDoehring

  authored
  1b83911

• fix PERK2's name

  warisa-r

  committed
  27b6033

• add short comment regarding PERK's abbreviation

  warisa-r

  committed
  e6560da

Commits on May 3, 2024

• fix export

  warisa-r

  committed
  c8201a5

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  DanielDoehring

  authored
  c204c99

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

  Show description for 1284c0b
  

  warisa-r

  and

  DanielDoehring

  authored
  1284c0b

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  DanielDoehring

  authored
  43ca527

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  DanielDoehring

  authored
  e8b5605

• minor corrections

  warisa-r

  committed
  de85230

• remove exported of PERK functions in extension

  warisa-r

  committed
  65a015a

• set verbose's default value in kwarg

  warisa-r

  committed
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Commits on May 4, 2024

• Merge branch 'main' into PERK_p2_Single_ext

  DanielDoehring

  authored
  e59df79

• fix path_monomial_coeffs

  warisa-r

  committed
  16f2001

• Merge branch 'PERK_p2_Single_ext' of github.com:warisa-r/Trixi.jl into PERK_p2_Single_ext

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  committed
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• fmt

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• add ECOS as dependency in test/Project.toml

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• bring back polynomial_optimizer so that user can call the constructor with file path can use filter_eigvals without having to load Convex and ECOS

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  committed
  8befaaf

• fix values for some tests and add use Convex and ECOS to load function extensions

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• fix error undefined b1

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• attempt to fix error from test by specifying Trixi.entropy

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• fmt

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• adjust the value of tests to allign with one in CI and add print command for a test in test_unit.jl

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Commits on May 5, 2024

• exclude convex warning

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• update test vals

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  7ffb056

• more warning exclusions

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Commits on May 6, 2024

• Merge branch 'main' into PERK_p2_Single_ext

  DanielDoehring

  authored
  86a7ca8

Commits on May 7, 2024

• Apply suggestions from code review

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  warisa-r

  and

  sloede

  authored
  4a4bb4e

• Apply suggestions from code review

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  warisa-r

  and

  sloede

  authored
  c706836

• minor fix

  warisa-r

  committed
  c9ae47f

• add what is used from ECOS

  warisa-r

  committed
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• spell check

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• add information about this PR in NEWS.md

  warisa-r

  committed
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• Update NEWS.md

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  warisa-r

  and

  JoshuaLampert

  authored
  a04be54

• fix NEWS.md

  warisa-r

  committed
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Commits on May 9, 2024

• change Trixi.entropy back to just entropy

  warisa-r

  committed
  b49dbd7

• Update NEWS.md

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  warisa-r

  and

  sloede

  authored
  847f02a

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  sloede

  authored
  ab3fae9

• Apply suggestions from code review

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  warisa-r

  and

  sloede

  authored
  69a6e1f

Commits on May 14, 2024

• Merge branch 'main' into PERK_p2_Single_ext

  DanielDoehring

  authored
  3b4a4da

• Apply suggestions from code review

  DanielDoehring

  authored
  3b441a5

• Apply suggestions from code review

  DanielDoehring

  authored
  9c0ed66

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

  DanielDoehring

  authored
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• Merge branch 'main' into PERK_p2_Single_ext

  DanielDoehring

  authored
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Commits on May 15, 2024

• add some explanations regarding the arguments of the constructors

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  committed
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• fmt

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  committed
  6833eb0

Commits on May 17, 2024

• exchange "c_end" for "cS" for consistency

  DanielDoehring

  committed
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• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  JoshuaLampert

  authored
  ad8b384

• add more explaination

  warisa-r

  committed
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• minor adjustment

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  committed
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• Merge branch 'main' into PERK_p2_Single_ext

  JoshuaLampert

  authored
  e4e397d

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  JoshuaLampert

  authored
  248129f

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  JoshuaLampert

  authored
  6891aaa

• Update src/time_integration/paired_explicit_runge_kutta/methods_PERK2.jl

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  warisa-r

  and

  JoshuaLampert

  authored
  339e355

Commits on May 21, 2024

• Merge branch 'main' into PERK_p2_Single_ext

  sloede

  authored
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