Gen3 Monthly Release 2025.01 icgc.bionimbus.org 1737491745

[PlanXCyborg]

Applying version 2025.01 to icgc.bionimbus.org

[github-actions]

icgc.bionimbus.org

❌ etlMapping.yaml - gitops.json mismatch

• Field error: Field [node_id] in explorerConfig.charts not found in etlMapping

[github-actions]

icgc.bionimbus.org/manifest.json

Deployment changes

• fence
  • activation of the feature depends on a new configuration setting: ALLOW_NEW_USER_ON_LOGIN (Feat: only allow login of onboarded users fence#1184)
  • any env that has S3 buckets in fence config that has wildcard characters should consider adopting this release (Fix/bucket name fence#1193)
• guppy
  • To enable this feature in helm charts add "allowRefresh": {{ .Values.allowRefresh }} to gen3-helm/helm/guppy/templates/guppy_config.yaml and then in your values.yaml file, specify allowRefresh as the boolean true value. (Feature/refresh guppy#273)
• portal
  • new config option dataDictionaryVersion that can be set to "new" or something else. If "new", then the new data dictionary component is loaded. This is a temporary solution until we have fully deprecated the old one. (Feat: enable old and new data dictionary for VA data-portal#1613)

Breaking changes

• fence
  • remove role field from /admin/user POST endpoint (Feat: remove role from POST /admin/user endpoint fence#1202)
  • set User.is_admin to DEPRECATED (Feat: remove role from POST /admin/user endpoint fence#1202)
  • deprecation notices for future breaking changes where we'll remove a number of legacy endpoints (Feat: deprecate legacy unused /admin/ endpoints fence#1201)
  • some of the admin endpoints and methods now expect username instead of name. (Feat: add support for soft delete user fence#1189)