Merge repo changes back in after fork sinc (#28)

* initial configuration (#2)

* --- (#1)

updated-dependencies:
- dependency-name: next
  dependency-type: direct:development
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* feat: update blurb on home page (#3)

* Update to version 0.10.31 (#4)

* initial configuration

* Chore/update to Gen3.2 version 0.10.30 (#29)

* update config and dependencies

* update config/package.json

* add eslint/prettier

* update typescript esplugin

* update github ci

* update Dockerfile

* Chore/patch 0 10 31 (#36)

* update config and dependencies

* update config/package.json

* add eslint/prettier

* update typescript esplugin

* update github ci

* update Dockerfile

* update to 0.10.31

* update to 0.10.31

* update dockerfile

* update dockerfile

* update dockerfile

* update dockerfile

* update dockerfile

* update docker

* testing update build ci

* testing update build ci

* Delete .idea directory

* update docker

* Update Dockerfile

* update Docker

* update config

* update config

* update colors

* update footer

* feat: update logo to official Prometheus (#6)

* fix: PROMETHEUS PNG logo (#7)

Co-authored-by: Andrew Prokhorenkov <[email protected]>

* feat: add OCC logo to footer (#8)

* feat: add OCC logo to footer

* fix: OCC logo PNG

* fix: description

* Update version to 0.10.32 (#9)

* Update landingPage.json (#10)

* Update to Gen3.2 version 0.10.33: Crosswalk and Multitab Discovery (#11)

* update config

* update gen3/core version

* update gen3/core version to fix integrity issue

* Fix/config (#12)

* update config

* update config

* update to 0.10.35 (#13)

* feat: add PDC (#14)

* feat: update crosswalk config (#15)

* fix: removed comments from JSON (#16)

* Update crosswalk.json (#17)

* update to 0.10.36 (#18)

* Update login.json - email (#19)

Corrected and updated email address from [email protected] to [email protected]

* PROM-111: add charts to discovery page (#21)

* Update Gen3.2  v0.10.46 (#22)

* update to 0.10.46

* update grafana app name

* update config

* update config again

* PROM-111: bump frontend framework version to 0.10.47 (#23)

* revert charts section (#24)

* add lock file

* add lock file 2

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: craigrbarnes <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Andrew Prokhorenkov <[email protected]>
Co-authored-by: Andrew Prokhorenkov <[email protected]>
Co-authored-by: smvgarcia <[email protected]>
Co-authored-by: Shawn O'Connor <[email protected]>

.env.development

@@ -1,6 +1,2 @@
 GEN3_COMMONS_NAME=gen3
-NEXT_PUBLIC_GEN3_API=https://localhost:3010
-NEXT_PUBLIC_GEN3_DOMAIN=https://localhost:3010
-
-# set these if you want to use different endpoints
-#NEXT_PUBLIC_GEN3_GUPPY_API=
+NEXT_PUBLIC_GEN3_API=https://prometheus.data-commons.org

config/gen3/crosswalk.json

@@ -1,28 +1,37 @@
 {
-  "mapping" : {
-    "source" : {
+  "showSubmittedIdInTable": false,
+  "mapping": {
+    "source": {
       "id": "prom",
-      "label": "Prometheus",
-      "description" : "PROject for Military Exposures and Toxin History Evaluation in US Service Members"
+      "label": "PROMETHEUS",
+      "description": "PROject for Military Exposures and Toxin History Evaluation in US Service Members"
     },
-    "external" : [
+    "external": [
+      {
+        "id": "PROMETHEUS",
+        "label": "PROMETHEUS",
+        "dataPath": "crosswalk->subject->https://prometheus.data-commons.org->case_id->value"
+      },
       {
         "id": "GDC",
-        "label": "Genomic Data Commons",
-        "dataPath": "crosswalk->subject->https://portal.gdc.cancer.gov->case.case_id->value",
+        "label": "GDC",
+        "dataPath": "crosswalk->subject->https://portal.gdc.cancer.gov->submitter_id->value",
         "description": "A repository and computational platform for cancer researchers who need to understand cancer, its clinical progression, and response to therapy."
       },
       {
-        "id": "VPOC",
-        "label": "VPOC",
-        "dataPath": "crosswalk->subject->https://vpodc.data-commons.org->case.submitter_id->value",
-        "description": "Veterans Precision Oncology Data Commons® (VPOC) The Veterans Data Commons supports the management, analysis and sharing of veteran oncologic data for the research community and aims to accelerate discovery and development of therapies, diagnostic tests, and other technologies for precision oncology"
+        "id": "PDC",
+        "label": "PDC",
+        "dataPath": "crosswalk->subject->https://proteomic.datacommons.cancer.gov->case_id->value"
+      },
+      {
+        "id": "BLOODPAC",
+        "label": "BLOODPAC",
+        "dataPath": "crosswalk->subject->https://data.bloodpac.org->subject.subject_id->value"
       },
       {
-        "id": "TCIA",
-        "label": "TCIA",
-        "dataPath": "crosswalk->subject->https://www.cancerimagingarchive.net->subject.subject_id->value",
-        "description": "The Cancer Imaging Archive (TCIA) is a service which de-identifies and hosts a large archive of medical images of cancer accessible for public download"
+        "id": "dbGaP",
+        "label": "dbGaP",
+        "dataPath": "crosswalk->subject->https://www.ncbi.nlm.nih.gov->dbgap_subject_id->value"
       }
     ]
   }