update Python pin to fix binder? #75
Workflow file for this run
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name: Test | |
on: push | |
jobs: | |
validate-notebooks: | |
name: Validate Notebooks | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
# Required for "run" commands to execute in the conda env. | |
shell: bash -l {0} | |
steps: | |
- name: Checkout Code | |
uses: actions/checkout@v3 | |
- name: Set Up Conda Environment | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
activate-environment: uc-python | |
environment-file: environment.yml | |
- name: Set Up Jupyter Kernel | |
run: | | |
python -m ipykernel install --user --name uc-python | |
- name: Install Papermill | |
run: | | |
conda install papermill | |
- name: Prep notebooks | |
run: | | |
# Remove nb cells that should be skipped in CI. | |
for nb in notebooks/*.ipynb; do | |
python scripts/prep_nb_for_ci.py "$nb" | |
done | |
- name: Run notebooks | |
run: | | |
for nb in notebooks/*.ipynb; do | |
echo "running $nb" | |
output=$(papermill --cwd notebooks/ "$nb" -) | |
done |