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Make new RST hyperlinks use double underlining, i.e. anonymous links,…
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… to avoid warning (obscure syntax)
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RudolfCardinal committed May 29, 2024
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12 changes: 6 additions & 6 deletions docs/source/introduction/publications.rst
Original file line number Diff line number Diff line change
Expand Up @@ -27,9 +27,9 @@ The primary reference publication is:
Clinical records anonymisation and text extraction (CRATE): an open-source
software system.
*BMC Medical Informatics and Decision Making* 17: 50.
`PubMed ID 28441940 <http://www.pubmed.gov/28441940>`_;
`DOI 10.1186/s12911-017-0437-1 <https://doi.org/10.1186/s12911-017-0437-1>`_;
`PDF <https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-017-0437-1.pdf>`_.
`PubMed ID 28441940 <http://www.pubmed.gov/28441940>`__;
`DOI 10.1186/s12911-017-0437-1 <https://doi.org/10.1186/s12911-017-0437-1>`__;
`PDF <https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-017-0437-1.pdf>`__.

Please cite this one if you use CRATE, or databases built with it. Thank you!

Expand All @@ -39,9 +39,9 @@ Developments to CRATE have also been reported in:
De-identified Bayesian personal identity matching for privacy-preserving
record linkage despite errors: development and validation.
*BMC Medical Informatics and Decision Making* 23: 85.
`PubMed ID 37147600 <http://www.pubmed.gov/37147600>`_;
`DOI 10.1186/s12911-023-02176-6 <https://doi.org/10.1186/s12911-023-02176-6>`_;
`PDF <https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-023-02176-6.pdf>`_.
`PubMed ID 37147600 <http://www.pubmed.gov/37147600>`__;
`DOI 10.1186/s12911-023-02176-6 <https://doi.org/10.1186/s12911-023-02176-6>`__;
`PDF <https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-023-02176-6.pdf>`__.

This one is the appropriate citation for CRATE's de-identified linkage
system.
6 changes: 3 additions & 3 deletions docs/source/linkage/fuzzy_id_match.rst
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Expand Up @@ -36,9 +36,9 @@ This tool is described in:
De-identified Bayesian personal identity matching for privacy-preserving
record linkage despite errors: development and validation.
*BMC Medical Informatics and Decision Making* 23: 85.
`PubMed ID 37147600 <http://www.pubmed.gov/37147600>`_;
`DOI 10.1186/s12911-023-02176-6 <https://doi.org/10.1186/s12911-023-02176-6>`_;
`PDF <https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-023-02176-6.pdf>`_.
`PubMed ID 37147600 <http://www.pubmed.gov/37147600>`__;
`DOI 10.1186/s12911-023-02176-6 <https://doi.org/10.1186/s12911-023-02176-6>`__;
`PDF <https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-023-02176-6.pdf>`__.

.. literalinclude:: _crate_fuzzy_id_match_help.txt
:language: none
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