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1. htsget-rs htsget-rs Public

   A server implementation of the htsget protocol for bioinformatics in Rust

   Rust 43 9

2. infrastructure infrastructure Public

   Infrastructure as Code at UMCCR

   Python 10 8

3. cwl-ica cwl-ica Public

   A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide

   Common Workflow Language 9 2

4. data-portal-apis data-portal-apis Public archive

   Superseded By OrcaBus - UMCCR Data Portal API Backend in cloud native serverless

   Python 1

5. orcabus orcabus Public

    🐋 UMCCR Pipeline & Workflow Orchestration

   Python 5

6. RNAsum RNAsum Public

   Pipeline for generating RNAseq-based cancer patient reports

   R 7 4