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project.yaml
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projects:
- project_name: development_workflows
project_id: 0df0356d-3637-48a5-80d1-a924642a6556
project_description: |
Development workflows, project is linked to the development
project
project_abbr: dev-wf
project_api_key_name: development_workflows
production: false
linked_projects:
- dc8e6ba9-b744-437b-b070-4cf014694b3d
- c9173925-a838-4394-9fc6-61cb93c252a1
tenant_id: YXdzLXVzLXBsYXRmb3JtOjEwMDAwNTM3OjBiYTU5YWUxLWZkYWUtNDNiYS1hM2I1LTRkMzY3YTQzYWJkNQ
tools:
- name: samtools-merge
path: samtools-merge
ica_workflow_name: samtools-merge_dev-wf
ica_workflow_id: wfl.a717e4b2ec484c4cab2910c813179738
versions:
- name: 1.12.0
path: 1.12.0/samtools-merge__1.12.0.cwl
ica_workflow_version_name: 1.12.0
modification_time: 2023-01-12T02:34:51UTC
run_instances: []
- name: tabix
path: tabix
ica_workflow_name: tabix_dev-wf
ica_workflow_id: wfl.e75e5b7c2981407db574f5e0e4b07a0d
versions:
- name: 0.2.6
path: 0.2.6/tabix__0.2.6.cwl
ica_workflow_version_name: 0.2.6
modification_time: 2024-01-04T01:01:59UTC
run_instances: []
- name: sambamba-merge-and-index
path: sambamba-merge-and-index
ica_workflow_name: sambamba-merge-and-index_dev-wf
ica_workflow_id: wfl.84d02a51ca1e4f4091a18ab73b1d3f73
versions:
- name: 0.8.0
path: 0.8.0/sambamba-merge-and-index__0.8.0.cwl
ica_workflow_version_name: 0.8.0
modification_time: 2024-01-04T01:02:00UTC
run_instances: []
- name: sambamba-sort-and-index
path: sambamba-sort-and-index
ica_workflow_name: sambamba-sort-and-index_dev-wf
ica_workflow_id: wfl.68849cc2a7094f87abbd6e8483169bc2
versions:
- name: 0.8.0
path: 0.8.0/sambamba-sort-and-index__0.8.0.cwl
ica_workflow_version_name: 0.8.0
modification_time: 2023-01-12T02:35:01UTC
run_instances: []
- name: sambamba-slice-and-index
path: sambamba-slice-and-index
ica_workflow_name: sambamba-slice-and-index_dev-wf
ica_workflow_id: wfl.591b79cb43d0492380e3039ed5c517c0
versions:
- name: 0.8.0
path: 0.8.0/sambamba-slice-and-index__0.8.0.cwl
ica_workflow_version_name: 0.8.0
modification_time: 2024-01-04T01:02:02UTC
run_instances: []
- name: sambamba-view-and-index
path: sambamba-view-and-index
ica_workflow_name: sambamba-view-and-index_dev-wf
ica_workflow_id: wfl.6304aa7f0fcb4a97a29ab27262383281
versions:
- name: 0.8.0
path: 0.8.0/sambamba-view-and-index__0.8.0.cwl
ica_workflow_version_name: 0.8.0
modification_time: 2024-01-04T01:02:03UTC
run_instances: []
- name: optitype
path: optitype
ica_workflow_name: optitype_dev-wf
ica_workflow_id: wfl.7747fed243b4422eb1c40cb1fa9fea75
versions:
- name: 1.3.5
path: 1.3.5/optitype__1.3.5.cwl
ica_workflow_version_name: 1.3.5
modification_time: 2023-01-12T02:35:06UTC
run_instances: []
- name: custom-subset-bam
path: custom-subset-bam
ica_workflow_name: custom-subset-bam_dev-wf
ica_workflow_id: wfl.18ab0d900ea0453384db086a4fbc5ed9
versions:
- name: 1.12.0
path: 1.12.0/custom-subset-bam__1.12.0.cwl
ica_workflow_version_name: 1.12.0
modification_time: 2023-01-12T02:35:08UTC
run_instances: []
- name: bedops
path: bedops
ica_workflow_name: bedops_dev-wf
ica_workflow_id: wfl.5808cc6b5c6b4386b1ad966fabcec1be
versions:
- name: 2.4.39
path: 2.4.39/bedops__2.4.39.cwl
ica_workflow_version_name: 2.4.39
modification_time: 2024-01-04T01:02:05UTC
run_instances: []
- name: dragen-germline
path: dragen-germline
ica_workflow_name: dragen-germline_dev-wf
ica_workflow_id: wfl.a19f90ebde874ceba9f3f41f82878e8c
versions:
- name: 3.7.5
path: 3.7.5/dragen-germline__3.7.5.cwl
ica_workflow_version_name: 3.7.5
modification_time: 2023-01-12T02:35:12UTC
run_instances: []
- name: 3.9.3
path: 3.9.3/dragen-germline__3.9.3.cwl
ica_workflow_version_name: 3.9.3
modification_time: 2023-03-06T03:13:43UTC
run_instances: []
- name: 4.0.3
path: 4.0.3/dragen-germline__4.0.3.cwl
ica_workflow_version_name: 4.0.3
modification_time: 2023-04-24T06:49:46UTC
run_instances: []
- name: 4.2.4
path: 4.2.4/dragen-germline__4.2.4.cwl
ica_workflow_version_name: 4.2.4
modification_time: 2024-02-02T02:31:24UTC
run_instances: []
- name: custom-create-tso500-samplesheet
path: custom-create-tso500-samplesheet
ica_workflow_name: custom-create-tso500-samplesheet_dev-wf
ica_workflow_id: wfl.a754b24fde75444b8e97f67412b935fe
versions:
- name: 1.0.0
path: 1.0.0/custom-create-tso500-samplesheet__1.0.0.cwl
ica_workflow_version_name: 1.0.0
modification_time: 2023-01-12T02:35:19UTC
run_instances: []
- name: tso500-ctdna-demultiplex-workflow
path: tso500-ctdna-demultiplex-workflow
ica_workflow_name: tso500-ctdna-demultiplex-workflow_dev-wf
ica_workflow_id: wfl.fd8c8ddabe824ae3a730aa2ce926785d
versions:
- name: 1.1.0--120
path: 1.1.0--120/tso500-ctdna-demultiplex-workflow__1.1.0--120.cwl
ica_workflow_version_name: 1.1.0--120
modification_time: 2023-02-21T23:52:47UTC
run_instances: []
- name: tso500-ctdna-analysis-workflow
path: tso500-ctdna-analysis-workflow
ica_workflow_name: tso500-ctdna-analysis-workflow_dev-wf
ica_workflow_id: wfl.867aabc177344a40ae61ef868ddd3c98
versions:
- name: 1.1.0--120
path: 1.1.0--120/tso500-ctdna-analysis-workflow__1.1.0--120.cwl
ica_workflow_version_name: 1.1.0--120
modification_time: 2023-02-21T23:52:49UTC
run_instances: []
- name: tso500-ctdna-reporting-workflow
path: tso500-ctdna-reporting-workflow
ica_workflow_name: tso500-ctdna-reporting-workflow_dev-wf
ica_workflow_id: wfl.5a87e61d60234647b282368b1beaa396
versions:
- name: 1.1.0--120
path: 1.1.0--120/tso500-ctdna-reporting-workflow__1.1.0--120.cwl
ica_workflow_version_name: 1.1.0--120
modification_time: 2023-01-12T02:35:26UTC
run_instances: []
- name: multiqc
path: multiqc
ica_workflow_name: multiqc_dev-wf
ica_workflow_id: wfl.c2ca973c62a24066bf82f63715d66083
versions:
- name: 1.10.1
path: 1.10.1/multiqc__1.10.1.cwl
ica_workflow_version_name: 1.10.1
modification_time: 2023-01-12T02:35:28UTC
run_instances: []
- name: 1.11.0
path: 1.11.0/multiqc__1.11.0.cwl
ica_workflow_version_name: 1.11.0
modification_time: 2023-01-12T02:35:30UTC
run_instances: []
- name: 1.12.0
path: 1.12.0/multiqc__1.12.0.cwl
ica_workflow_version_name: 1.12.0
modification_time: 2023-01-12T02:35:31UTC
run_instances: []
- name: 1.14.0
path: 1.14.0/multiqc__1.14.0.cwl
ica_workflow_version_name: 1.14.0
modification_time: 2023-03-14T23:29:35UTC
run_instances: []
- name: dragen-alignment
path: dragen-alignment
ica_workflow_name: dragen-alignment_dev-wf
ica_workflow_id: wfl.b2b0f4d467df453abd5526eb73b3afb7
versions:
- name: 3.7.5
path: 3.7.5/dragen-alignment__3.7.5.cwl
ica_workflow_version_name: 3.7.5
modification_time: 2023-01-12T02:35:34UTC
run_instances: []
- name: 3.9.3
path: 3.9.3/dragen-alignment__3.9.3.cwl
ica_workflow_version_name: 3.9.3
modification_time: 2023-02-21T23:52:54UTC
run_instances: []
- name: 4.0.3
path: 4.0.3/dragen-alignment__4.0.3.cwl
ica_workflow_version_name: 4.0.3
modification_time: 2023-04-24T06:49:59UTC
run_instances: []
- name: arriba-drawing
path: arriba-drawing
ica_workflow_name: arriba-drawing_dev-wf
ica_workflow_id: wfl.7620a30e5df3446091c73d3fa10db084
versions:
- name: 2.0.0
path: 2.0.0/arriba-drawing__2.0.0.cwl
ica_workflow_version_name: 2.0.0
modification_time: 2023-01-12T02:35:40UTC
run_instances: []
- name: 2.3.0
path: 2.3.0/arriba-drawing__2.3.0.cwl
ica_workflow_version_name: 2.3.0
modification_time: 2023-01-30T00:41:27UTC
run_instances: []
- name: 2.4.0
path: 2.4.0/arriba-drawing__2.4.0.cwl
ica_workflow_version_name: 2.4.0
modification_time: 2023-10-06T10:41:58UTC
run_instances: []
- name: custom-create-directory
path: custom-create-directory
ica_workflow_name: custom-create-directory_dev-wf
ica_workflow_id: wfl.d58562105cb74b67906be002c2f53bef
versions:
- name: 1.0.0
path: 1.0.0/custom-create-directory__1.0.0.cwl
ica_workflow_version_name: 1.0.0
modification_time: 2023-01-12T02:35:43UTC
run_instances: []
- name: 2.0.1
path: 2.0.1/custom-create-directory__2.0.1.cwl
ica_workflow_version_name: 2.0.1
modification_time: 2023-01-16T00:37:08UTC
run_instances: []
- name: 1.0.1
path: 1.0.1/custom-create-directory__1.0.1.cwl
ica_workflow_version_name: 1.0.1
modification_time: 2023-01-12T02:35:47UTC
run_instances: []
- name: dragen-build-reference-tarball
path: dragen-build-reference-tarball
ica_workflow_name: dragen-build-reference-tarball_dev-wf
ica_workflow_id: wfl.01656410e5f949b194ae7e629568f0dd
versions:
- name: 3.7.5
path: 3.7.5/dragen-build-reference-tarball__3.7.5.cwl
ica_workflow_version_name: 3.7.5
modification_time: 2023-01-12T02:35:49UTC
run_instances: []
- name: 3.8.4
path: 3.8.4/dragen-build-reference-tarball__3.8.4.cwl
ica_workflow_version_name: 3.8.4
modification_time: 2023-01-12T02:35:52UTC
run_instances: []
- name: 4.0.3
path: 4.0.3/dragen-build-reference-tarball__4.0.3.cwl
ica_workflow_version_name: 4.0.3
modification_time: 2023-07-17T05:18:23UTC
run_instances: []
- name: 4.2.4
path: 4.2.4/dragen-build-reference-tarball__4.2.4.cwl
ica_workflow_version_name: 4.2.4
modification_time: 2024-02-02T02:31:40UTC
run_instances: []
- name: dragen-transcriptome
path: dragen-transcriptome
ica_workflow_name: dragen-transcriptome_dev-wf
ica_workflow_id: wfl.1bdb5d1976474c39b8290d8b5dc0520e
versions:
- name: 3.8.4
path: 3.8.4/dragen-transcriptome__3.8.4.cwl
ica_workflow_version_name: 3.8.4
modification_time: 2023-01-12T02:35:56UTC
run_instances: []
- name: 3.9.3
path: 3.9.3/dragen-transcriptome__3.9.3.cwl
ica_workflow_version_name: 3.9.3
modification_time: 2023-10-05T03:04:37UTC
run_instances: []
- name: 4.0.3
path: 4.0.3/dragen-transcriptome__4.0.3.cwl
ica_workflow_version_name: 4.0.3
modification_time: 2023-05-08T06:01:23UTC
run_instances: []
- name: 4.2.4
path: 4.2.4/dragen-transcriptome__4.2.4.cwl
ica_workflow_version_name: 4.2.4
modification_time: 2024-02-02T02:31:44UTC
run_instances: []
- name: umccrise
path: umccrise
ica_workflow_name: umccrise_dev-wf
ica_workflow_id: wfl.af61d2b172e84cbfa85eaf184226db8b
versions:
- name: 1.2.1--0
path: 1.2.1--0/umccrise__1.2.1--0.cwl
ica_workflow_version_name: 1.2.1--0
modification_time: 2023-01-12T02:36:01UTC
run_instances: []
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