Add render jobs, move scripts

render/job.sh

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+#!/bin/bash -l
+#SBATCH -J rose
+#SBATCH -o /path/to/rose/states/rose.out
+#SBATCH -e /path/to/rose/states/rose.err
+#SBATCH --mail-type=ALL
+#SBATCH [email protected]
+#SBATCH --ntasks=21
+#SBATCH --nodes=3
+#SBATCH --ntasks-per-node=7
+#SBATCH --time=48:00:00
+
+source /home/SPACK2023/share/spack/setup-env.sh
+module load apptainer-1.0.3-gcc-12.2.0-aojy6ca
+
+cd /path/to/rose
+srun -n 21 ./render.sh states/state.pvsm

render/render.sh

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+#!/bin/bash
+# This script is to be called from the batch job,
+# so that Slurm environment variables are set after scheduling.
+
+STATE_NAME=${1%.*}
+TOTAL_TASK_NUMBER=21
+echo "State name: $STATE_NAME"
+mkdir -p "$STATE_NAME"
+
+apptainer exec --bind /scratch:/scratch \
+    /path/to/rose.sif render_state.py \
+    --state=$1 \
+    --total-task-number=$TOTAL_TASK_NUMBER \
+    --task-id=$(($SLURM_NODEID*$SLURM_NTASKS_PER_NODE + $SLURM_LOCALID)) \
+    --output-dir=$STATE_NAME