Repro vip add support public exec

deploy.sh

@@ -0,0 +1 @@
+cp vip-portal/target/vip-portal-2.6-SNAPSHOT-local.war /home/cornier/workspace/tools/apache-tomcat-9.0.70/webapps/ROOT.war

vip-application/src/main/java/fr/insalyon/creatis/vip/application/Application.gwt.xml

@@ -40,7 +40,9 @@ knowledge of the CeCILL-B license and that you accept its terms.
 
     <!-- Servlets -->
     <servlet class="fr.insalyon.creatis.vip.application.server.rpc.ApplicationServiceImpl" path="/applicationservice"/>
+    <servlet class="fr.insalyon.creatis.vip.application.server.rpc.ExecutionsServiceImpl" path="/executionsservice"/>
     <servlet class="fr.insalyon.creatis.vip.application.server.rpc.WorkflowServiceImpl" path="/workflowservice"/>
     <servlet class="fr.insalyon.creatis.vip.application.server.rpc.JobServiceImpl" path="/jobservice"/>
     <servlet class="fr.insalyon.creatis.vip.application.server.rpc.LoggerServlet" path="/remote_logging"/>
+    <servlet class="fr.insalyon.creatis.vip.application.server.rpc.ReproVipServiceImpl" path="/reprovipservice"/>
 </module>

vip-application/src/main/java/fr/insalyon/creatis/vip/application/client/ApplicationConstants.java

@@ -46,6 +46,7 @@ public class ApplicationConstants {
     public final static String TAB_MANAGE_ENGINE = "manage_engine_tab";
     public final static String TAB_MONITOR = "monitor_tab";
     public final static String TAB_STATS = "stats_tab";
+    public final static String TAB_REPROVIP = "reproVip_tab";
     // Icons
     private static final String IMG_FOLDER = "application/";
     public static final String ICON_APPLICATION = IMG_FOLDER + "icon-application.png";
@@ -107,6 +108,7 @@ public class ApplicationConstants {
     public static final String APP_SIMULATION_ERROR = "Error File";
     public static final String APP_SIMULATION_OUT = "Output File";
     public static final String APP_PUBLIC_APPLICATION = "Applications";
+    public static final String APP_REPRO_VIP = "ReproVIP";
     // Application Images
     public static final String APP_IMG_APPLICATION = IMG_FOLDER + "app-application.png";
     public static final String APP_IMG_CLASSES = IMG_FOLDER + "app-classes.png";

vip-application/src/main/java/fr/insalyon/creatis/vip/application/client/rpc/ExecutionsService.java

@@ -0,0 +1,25 @@
+package fr.insalyon.creatis.vip.application.client.rpc;
+
+import com.google.gwt.core.client.GWT;
+import com.google.gwt.user.client.rpc.RemoteService;
+import com.google.gwt.user.client.rpc.ServiceDefTarget;
+import fr.insalyon.creatis.vip.application.client.view.ApplicationException;
+import fr.insalyon.creatis.vip.core.client.bean.Execution;
+
+import java.util.List;
+
+public interface ExecutionsService extends RemoteService {
+
+    public static final String SERVICE_URI = "/executionsservice";
+
+    public static class Util {
+        public static ExecutionsServiceAsync getInstance() {
+            ExecutionsServiceAsync instance = (ExecutionsServiceAsync) GWT.create(ExecutionsService.class);
+            ServiceDefTarget target = (ServiceDefTarget) instance;
+            target.setServiceEntryPoint(GWT.getModuleBaseURL() + SERVICE_URI);
+            return instance;
+        }
+    }
+    public List<Execution> getExecutions() throws ApplicationException;
+}
+

vip-application/src/main/java/fr/insalyon/creatis/vip/application/client/rpc/ExecutionsServiceAsync.java

@@ -0,0 +1,10 @@
+package fr.insalyon.creatis.vip.application.client.rpc;
+
+import com.google.gwt.user.client.rpc.AsyncCallback;
+import fr.insalyon.creatis.vip.core.client.bean.Execution;
+
+import java.util.List;
+
+public interface ExecutionsServiceAsync {
+    void getExecutions(AsyncCallback<List<Execution>> callback);
+}

vip-application/src/main/java/fr/insalyon/creatis/vip/application/client/rpc/ReproVipService.java

@@ -0,0 +1,31 @@
+package fr.insalyon.creatis.vip.application.client.rpc;
+
+import com.google.gwt.core.client.GWT;
+import com.google.gwt.user.client.rpc.RemoteService;
+import com.google.gwt.user.client.rpc.ServiceDefTarget;
+import fr.insalyon.creatis.vip.application.client.view.ApplicationException;
+import fr.insalyon.creatis.vip.core.client.bean.Execution;
+import fr.insalyon.creatis.vip.core.client.bean.User;
+import fr.insalyon.creatis.vip.core.client.view.CoreException;
+
+public interface ReproVipService extends RemoteService {
+
+    public static final String SERVICE_URI = "/reprovipservice";
+
+    public static class Util {
+
+        public static ReproVipServiceAsync getInstance() {
+            ReproVipServiceAsync instance = (ReproVipServiceAsync) GWT.create(ReproVipService.class);
+            ServiceDefTarget target = (ServiceDefTarget) instance;
+            target.setServiceEntryPoint(GWT.getModuleBaseURL() + SERVICE_URI);
+            return instance;
+        }
+    }
+    public void executionAdminEmail(Execution execution);
+    void addExecution(Execution execution) throws CoreException;
+    void updateExecution(String executionID, String newStatus) throws CoreException;
+    void executionOutputData(String executionID) throws CoreException;
+    String downloadJsonOutputData(String executionID) throws CoreException;
+    void createReproVipDirectory(String executionName, String executionID, String version) throws CoreException;
+}
+

vip-application/src/main/java/fr/insalyon/creatis/vip/application/client/rpc/ReproVipServiceAsync.java

@@ -0,0 +1,15 @@
+package fr.insalyon.creatis.vip.application.client.rpc;
+
+import com.google.gwt.user.client.rpc.AsyncCallback;
+import fr.insalyon.creatis.vip.core.client.bean.Execution;
+import fr.insalyon.creatis.vip.core.client.bean.User;
+
+public interface ReproVipServiceAsync {
+    void executionAdminEmail(Execution execution, AsyncCallback<Void> callback);
+    void addExecution(Execution execution, AsyncCallback<Void> asyncCallback);
+    void updateExecution(String executionID, String newStatus, AsyncCallback<Void> asyncCallback);
+    void executionOutputData(String executionID, AsyncCallback<Void> callback);
+    void downloadJsonOutputData(String executionID, AsyncCallback<String> callback);
+    void createReproVipDirectory(String executionName, String execution, String version, AsyncCallback<Void> callback);
+}
+

vip-application/src/main/java/fr/insalyon/creatis/vip/application/client/view/ApplicationHomeParser.java

@@ -35,6 +35,7 @@
 import fr.insalyon.creatis.vip.application.client.ApplicationConstants;
 import fr.insalyon.creatis.vip.application.client.view.monitor.SimulationsTab;
 import fr.insalyon.creatis.vip.application.client.view.system.application.ManageApplicationsTab;
+import fr.insalyon.creatis.vip.application.client.view.system.application.ReproVipTab;
 import fr.insalyon.creatis.vip.core.client.CoreModule;
 import fr.insalyon.creatis.vip.core.client.bean.User;
 import fr.insalyon.creatis.vip.core.client.view.CoreConstants;
@@ -56,6 +57,9 @@ public void loadApplications() {
 
         addApplication(ApplicationConstants.APP_PUBLIC_APPLICATION,
                 ApplicationConstants.APP_IMG_APPLICATION);
+
+        addApplication(ApplicationConstants.APP_REPRO_VIP,
+                ApplicationConstants.APP_IMG_APPLICATION);
     }
 
     @Override
@@ -72,6 +76,12 @@ public boolean parse(String applicationName, String applicationVersion) {
                     () -> new ManageApplicationsTab(true));
             return true;
         }
+        if (applicationName.equals(ApplicationConstants.APP_REPRO_VIP)) {
+            Layout.getInstance().addTab(
+                    ApplicationConstants.TAB_REPROVIP,
+                    () -> new ReproVipTab());
+            return true;
+        }
         return false;
     }
 }

vip-application/src/main/java/fr/insalyon/creatis/vip/application/client/view/monitor/ViewerWindow.java

@@ -180,9 +180,33 @@ public void onClick(ClickEvent event) {
             }
         });
         toolStrip.addButton(downloadButton);
+
+        if (!file) {
+            ToolStripButton jsonDownloadButton = new ToolStripButton();
+            jsonDownloadButton.setTitle("Download JSON");
+            jsonDownloadButton.addClickHandler(new ClickHandler() {
+                public void onClick(ClickEvent event) {
+                    downloadJsonContent();
+                }
+            });
+            toolStrip.addButton(jsonDownloadButton);
+        }
     }
 
     private void loadString() {
         pane.setContents(content.replaceAll("<", "&lt;").replaceAll(">", "&gt;").replaceAll("\n", "<br />"));
     }
+
+    private void downloadJsonContent() {
+        String jsonContent = this.content;
+        String mimeType = "application/json;charset=utf-8;";
+        String blobData = "data:" + mimeType + ", " + encodeURIComponent(jsonContent);
+        com.google.gwt.user.client.Window.open(blobData, "_blank", "Download JSON");
+    }
+
+    // This is a helper method for encoding the content
+    private static native String encodeURIComponent(String content) /*-{
+    return encodeURIComponent(content);
+}-*/;
+
 }

vip-application/src/main/java/fr/insalyon/creatis/vip/application/client/view/monitor/menu/SimulationsContextMenu.java

@@ -42,16 +42,19 @@
 import fr.insalyon.creatis.vip.application.client.ApplicationConstants;
 import fr.insalyon.creatis.vip.application.client.rpc.WorkflowService;
 import fr.insalyon.creatis.vip.application.client.view.common.AbstractSimulationTab;
-import fr.insalyon.creatis.vip.application.client.view.launch.LaunchTab;
 import fr.insalyon.creatis.vip.application.client.view.launch.RelaunchService;
 import fr.insalyon.creatis.vip.application.client.view.monitor.ChangeSimulationUserLayout;
 import fr.insalyon.creatis.vip.application.client.view.monitor.SimulationStatus;
 import fr.insalyon.creatis.vip.application.client.view.monitor.SimulationTab;
 import fr.insalyon.creatis.vip.application.client.view.monitor.SimulationsTab;
 import fr.insalyon.creatis.vip.core.client.CoreModule;
+import fr.insalyon.creatis.vip.core.client.bean.Execution;
 import fr.insalyon.creatis.vip.core.client.view.CoreConstants;
 import fr.insalyon.creatis.vip.core.client.view.ModalWindow;
 import fr.insalyon.creatis.vip.core.client.view.layout.Layout;
+import fr.insalyon.creatis.vip.application.client.view.system.application.MakeExecutionPublicTab;
+import fr.insalyon.creatis.vip.core.server.business.BusinessException;
+
 import java.util.Map;
 
 /**
@@ -69,8 +72,8 @@ public class SimulationsContextMenu extends Menu {
     private String simulationUser;
 
     public SimulationsContextMenu(ModalWindow modal, final String simulationID,
-            final String title, final SimulationStatus status, String applicationName,
-            String applicationVersion, String applicationClass, String simulationUser) {
+                                  final String title, final SimulationStatus status, String applicationName,
+                                  String applicationVersion, String applicationClass, String simulationUser) {
 
         this.modal = modal;
         this.simulationID = simulationID;
@@ -90,8 +93,8 @@ public SimulationsContextMenu(ModalWindow modal, final String simulationID,
             @Override
             public void onClick(MenuItemClickEvent event) {
                 Layout.getInstance().addTab(
-                    AbstractSimulationTab.tabIdFrom(simulationID),
-                    () -> new SimulationTab(simulationID, title, status));
+                        AbstractSimulationTab.tabIdFrom(simulationID),
+                        () -> new SimulationTab(simulationID, title, status));
             }
         });
 
@@ -181,28 +184,46 @@ public void onClick(MenuItemClickEvent event) {
             }
         });
 
+        MenuItem makePublicExecutionItem = new MenuItem("Make this execution public");
+        makePublicExecutionItem.setIcon(ApplicationConstants.ICON_SIMULATION_VIEW);
+        makePublicExecutionItem.addClickHandler(new ClickHandler() {
+            @Override
+            public void onClick(MenuItemClickEvent event) {
+                SC.ask("Do you really want to make this execution public:  ("
+                        + title + ")?", new BooleanCallback() {
+                    @Override
+                    public void execute(Boolean value) {
+                        if (value) {
+                            Execution execution = new Execution(simulationID, simulationName, applicationName, applicationVersion, "Pending", simulationUser, "comments");
+                            Layout.getInstance().addTab(CoreConstants.TAB_MAKE_EXECUTION_PUBLIC, () -> new MakeExecutionPublicTab(execution));
+                        }
+                    }
+                });
+            }
+        });
+
         MenuItemSeparator separator = new MenuItemSeparator();
 
         switch (status) {
             case Running:
                 if (CoreModule.user.isSystemAdministrator()) {
-                    this.setItems(viewItem, killItem, separator, relauchItem, separator, changeUserItem);
+                    this.setItems(viewItem, killItem, separator, relauchItem, separator, changeUserItem, separator, makePublicExecutionItem);
                 } else {
-                    this.setItems(viewItem, killItem, separator, relauchItem);
+                    this.setItems(viewItem, killItem, separator, relauchItem, separator, makePublicExecutionItem);
                 }
                 break;
 
             case Completed:
                 if (CoreModule.user.isSystemAdministrator()) {
-                    this.setItems(viewItem, cleanItem, separator, relauchItem, separator, changeUserItem);
+                    this.setItems(viewItem, cleanItem, separator, relauchItem, separator, changeUserItem, separator, makePublicExecutionItem);
                 } else {
-                    this.setItems(viewItem, cleanItem, separator, relauchItem);
+                    this.setItems(viewItem, cleanItem, separator, relauchItem, separator, makePublicExecutionItem);
                 }
                 break;
 
             case Cleaned:
                 if (CoreModule.user.isSystemAdministrator()) {
-                    this.setItems(viewItem, purgeItem, separator, changeUserItem);
+                    this.setItems(viewItem, purgeItem, separator, changeUserItem, separator, makePublicExecutionItem);
                 } else {
                     this.setItems(viewItem);
                 }
@@ -211,9 +232,9 @@ public void onClick(MenuItemClickEvent event) {
             case Failed:
             case Killed:
                 if (CoreModule.user.isSystemAdministrator()) {
-                    this.setItems(viewItem, markCompletedItem, cleanItem, separator, relauchItem, separator, changeUserItem);
+                    this.setItems(viewItem, markCompletedItem, cleanItem, separator, relauchItem, separator, changeUserItem, separator, makePublicExecutionItem);
                 } else {
-                    this.setItems(viewItem, cleanItem, separator, relauchItem);
+                    this.setItems(viewItem, cleanItem, separator, relauchItem, separator, makePublicExecutionItem);
                 }
         }
     }
@@ -318,7 +339,7 @@ public void onFailure(Throwable caught) {
             public void onSuccess(final Map<String, String> result) {
                 modal.hide();
                 String tabId =
-                    ApplicationConstants.getLaunchTabID(applicationName);
+                        ApplicationConstants.getLaunchTabID(applicationName);
                 Layout.getInstance().removeTab(tabId);
                 RelaunchService.getInstance().relaunch(
                         applicationName, applicationVersion, applicationClass, simulationName, result, tabId);

vip-application/src/main/java/fr/insalyon/creatis/vip/application/client/view/system/application/ExecutionsContextMenu.java

@@ -0,0 +1,92 @@
+package fr.insalyon.creatis.vip.application.client.view.system.application;
+
+import com.google.gwt.user.client.rpc.AsyncCallback;
+import com.smartgwt.client.util.SC;
+import com.smartgwt.client.widgets.menu.Menu;
+import com.smartgwt.client.widgets.menu.MenuItem;
+import com.smartgwt.client.widgets.menu.events.ClickHandler;
+import com.smartgwt.client.widgets.menu.events.MenuItemClickEvent;
+import fr.insalyon.creatis.vip.application.client.rpc.ReproVipService;
+import fr.insalyon.creatis.vip.application.client.rpc.ReproVipServiceAsync;
+import fr.insalyon.creatis.vip.application.client.view.monitor.ViewerWindow;
+import fr.insalyon.creatis.vip.core.client.bean.Execution;
+import fr.insalyon.creatis.vip.core.client.bean.User;
+import fr.insalyon.creatis.vip.core.client.view.CoreConstants;
+import fr.insalyon.creatis.vip.core.client.view.ModalWindow;
+
+public class ExecutionsContextMenu extends Menu {
+    private ModalWindow modal;
+    private String executionID;
+    private ReproVipServiceAsync reproVipServiceAsync = ReproVipService.Util.getInstance();
+    private ReproVipService reproVipService;
+    public ExecutionsContextMenu(ModalWindow modal, String executionName, String executionID, String version){
+        this.modal = modal;
+        this.executionID = executionID;
+        this.setShowShadow(true);
+        this.setShadowDepth(10);
+        this.setWidth(90);
+
+        MenuItem OptionPublicExecutionItem = new MenuItem("Option make it public");
+        OptionPublicExecutionItem.setIcon(CoreConstants.ICON_SUCCESS);
+        OptionPublicExecutionItem.addClickHandler(new ClickHandler() {
+            @Override
+            public void onClick(MenuItemClickEvent event) {
+                createReproVipDirectory(executionName, executionID, version);
+                //MakexExecutionPublic();
+            }
+        });
+
+        MenuItem DownloadOutputDataItem = new MenuItem("Donwload outputs");
+        DownloadOutputDataItem.setIcon(CoreConstants.ICON_INFO);
+        DownloadOutputDataItem.addClickHandler(new ClickHandler() {
+            @Override
+            public void onClick(MenuItemClickEvent event) {
+                DownloadOutputDataExecution();
+            }
+        });
+
+        this.setItems(OptionPublicExecutionItem, DownloadOutputDataItem);
+    }
+    private void MakexExecutionPublic() {
+        final AsyncCallback<Void> callback = new AsyncCallback<Void>() {
+            @Override
+            public void onFailure(Throwable caught) {
+                modal.hide();
+                SC.warn("Unable to make this execution public:<br />" + caught.getMessage());
+            }
+            @Override
+            public void onSuccess(Void result) {
+                modal.hide();
+                SC.say("Execution made public successfully");
+            }
+        };
+        modal.show("Make execution public", true);
+        reproVipServiceAsync.updateExecution(executionID, "Public", callback);
+    }
+    private void DownloadOutputDataExecution() {
+        final AsyncCallback<String> callback = new AsyncCallback<String>() {
+            @Override
+            public void onFailure(Throwable caught) {
+                modal.hide();
+                SC.warn("Unable to download outputs of this execution public:<br />" + caught.getMessage());
+            }
+            @Override
+            public void onSuccess(String s) {
+                modal.hide();
+                new ViewerWindow("Execution Output Data", executionID, s).show();
+            }
+        };
+        modal.show("Download Outputs", true);
+        reproVipServiceAsync.downloadJsonOutputData(executionID, callback);
+    }
+    public void createReproVipDirectory(String executionName, String executionID, String version) {
+        reproVipServiceAsync.createReproVipDirectory(executionName, executionID, version, new AsyncCallback<Void>() {
+            public void onFailure(Throwable caught) {
+                SC.warn("Error creating ReproVip directory: " + caught.getMessage());
+            }
+            public void onSuccess(Void result) {
+                SC.say("ReproVip directory successfully created");
+            }
+        });
+    }
+}