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model editing and discovery beyond parameter values #6

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merged 15 commits into from
Feb 25, 2025

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@jcschaff jcschaff commented Feb 21, 2025

model editing and discovery beyond parameter values is needed for scripting of vcell workflows.

improve libsbml-based model editing
add vcml-based model editing to/from VCML XML format.
calls /api/v1/solver/getFVSolverInputFromVCML to retrieve solver input files from edited VCML (server side math re-generation and geometry processing).

@jcschaff jcschaff self-assigned this Feb 21, 2025
@jcschaff jcschaff merged commit fdcd6b1 into main Feb 25, 2025
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@jcschaff jcschaff deleted the more-model-editing branch February 25, 2025 22:53
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