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Super basic hypergeometric filter #284

Merged
merged 33 commits into from
Oct 21, 2024
Merged

Super basic hypergeometric filter #284

merged 33 commits into from
Oct 21, 2024

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ekg
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@ekg ekg commented Oct 19, 2024

Fundamentally change the hypergeometric filtering so that we set a fixed numerator for the threshold calculation of a single shared kmer.

This leads to consistency across subindex mappings. Performance seems fine, which was surprising, and I'm still trying to understand.

ekg added 30 commits October 14, 2024 12:03
@ekg ekg merged commit eef9040 into main Oct 21, 2024
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