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update Changes for release 57.5.0
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dozy committed Nov 4, 2019
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11 changes: 10 additions & 1 deletion Changes
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LIST OF CHANGES
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- add BWA MEM2 support to sequence_align function
release 57.5.0
- add BWA MEM2 support to seq_alignment function
- bug fix: add -f to rm command removing intermediate files (to
avoid error when no intermediate files are present)
- allow selection of duplicate marking method (biobambam,samtools
or picard) in seq_alignment via product_release.yml
- detect flowcell type and set uses_patterned_flowcell attribute
to allow setting of optical duplicate region size
- add ability to select bwakit postalt processing (if reference has
alternate haplotypes) in seq_alignment via product_release.yml

release 57.4.0
- change genotype qc check to cram input
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