Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Added a method for aggregation by library #772

Merged
merged 3 commits into from
Nov 27, 2023
Merged

Conversation

mgcam
Copy link
Member

@mgcam mgcam commented Oct 30, 2023

No description provided.

Moved tests for aggregation across lanes to a new test
scripts. Tests for a new merge by library method will
be added to this new test script.
@mgcam mgcam force-pushed the merge_by_library branch 4 times, most recently from 627d467 to baf8122 Compare November 16, 2023 13:17
Also refactored the method itself.
@mgcam mgcam marked this pull request as ready for review November 16, 2023 15:17
@dozy dozy assigned dozy and unassigned dozy Nov 20, 2023
Copy link
Member

@dkj dkj left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Code eye-balled and together with tests here and use of change with downstream library/tools all suggest this is good.

The aggregation method is conservative/safe - we could potentially relax contraints in the future such as the mentioned run level (but also common tag_index, common set across lanes).

@dkj dkj merged commit 0d7b02d into wtsi-npg:devel Nov 27, 2023
2 checks passed
@mgcam mgcam deleted the merge_by_library branch January 3, 2025 16:21
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants