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Record all recent changes #773

Merged
merged 2 commits into from
Oct 31, 2023
Merged

Record all recent changes #773

merged 2 commits into from
Oct 31, 2023

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mgcam
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@mgcam mgcam commented Oct 31, 2023

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@jmtcsngr jmtcsngr self-requested a review October 31, 2023 11:10
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Small details in text.

Changes Outdated
- Removed the use of 'xml' lims driver from all tests.
- Deleted 'xml' lims driver class and all classes, which supported this
functionality, together with all related tests and test data.
- In release 97.0.0, ihe default LIMS driver type in samplesheet generation
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Suggested change
- In release 97.0.0, ihe default LIMS driver type in samplesheet generation
- In release 97.0.0, the default LIMS driver type in samplesheet generation

Changes Outdated
@@ -1,5 +1,35 @@
LIST OF CHANGES

- Removed the use of 'xml' lims driver from all tests.
- Deleted 'xml' lims driver class and all classes, which supported this
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Suggested change
- Deleted 'xml' lims driver class and all classes, which supported this
- Deleted 'xml' lims driver class and all classes which supported this

Changes Outdated
- reimplemented the 'reference_genome' method to exclude a fallback to
a study reference for tag zero and lane-level objects when samples
have different references.
- Restricted the 'all_lanes_mergeable' flag in the 'lonf_info' role to
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Suggested change
- Restricted the 'all_lanes_mergeable' flag in the 'lonf_info' role to
- Restricted the 'all_lanes_mergeable' flag in the 'long_info' role to

Changes Outdated
removal:
- deleted all previously deprecated methods ('seq_qc_state',
'associated_lims', 'associated_child_lims', 'associated_child_lims_ia');
- deleted methods, for which we do not have data in ml warehouse, our
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Suggested change
- deleted methods, for which we do not have data in ml warehouse, our
- deleted methods for which we do not have data in ml warehouse, our

@jmtcsngr jmtcsngr merged commit 895b02e into wtsi-npg:devel Oct 31, 2023
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2 participants