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Created a stand alone ref. genome name parser. #844

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merged 1 commit into from
Sep 4, 2024

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@mgcam mgcam commented Sep 3, 2024

Moved the parser for the LIMS reference genome notation from npg_tracking::data::reference::find to a new package npg_tracking::data::reference::util, thus providing a stand-alone implementation of the parser.

Removed dependency of st::api::lims on npg_tracking::data::reference::find since the latter brings in dependency on npg_tracking::data::reference::list, which requires that the reference repository root is defined and exists.

Moved the parser for the LIMS reference genome notation from
npg_tracking::data::reference::find to a new package
npg_tracking::data::reference::util, thus providing a stand-alone
implementation of the parser.

Removed dependency of st::api::lims on npg_tracking::data::reference::find
since the latter brings in dependency on npg_tracking::data::reference::list,
which requires that the reference repository root is defined and exists.
@jmtcsngr jmtcsngr merged commit 570f068 into wtsi-npg:devel Sep 4, 2024
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